Regulated Operon: spoVD

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
spoVD
+ 1584214..1586154
COG0768M spoVD-BAC  

Operon evidence: Genome analysis
Reference: Daniel RA & Errington J (1993)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -37:+7 1584149..1584192 ATCGTTCTACCTGTCCAAATTCAGGCATAAAATGAAACAAGCCT Daniel RA, et al. (1994): RG DB OV PE
SpoIIID Negative -33:-21 1584153..1584171 TTCTACCTGTCCAAATTCA Zhang B, et al. (1997): RO FT GS
SpoIIID Negative -9:+8 1584177..1584193 AAAATGAAACAAGCCTA Zhang B, et al. (1997): RO FT GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAGGAGGCAGCCGATTGATTCGGGCTGCCTATTCTTTTATTGCAGA
     >>>>>>>>>>     <<<<<<<<<<<
1586141..1586166
-13..12
-19.3
spoVD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai