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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | sppA-yteJ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| sppA | yteI | - | 3020040..3021047 | COG0616OU | ||
| yteJ | - | 3019533..3020027 | COG1714S |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Genbank AF008220, Huang X, et al. (1999) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigW | Promoter | -38:+3 | 3021072..3021112 | TGAAGTGAAACATTTTTCATATTGAATCGTATAATGAGAGA |
Huang X, et al. (1999): S1 Cao M, et al. (2002): AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GATAACCCGGACTTCCGTCCGGGTTTATTTTTTTAGGA >>>>>>> <<<<<<< |
yteJ |
|