Regulated Operon: sspB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
sspB
- 1050031..1050234

sspA-BAC  

Operon evidence: Northern blotting (0.35 kb transcript)
Reference: Connors MJ, et al. (1986)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -40:+7 1050344..1050390 CTCCGCATGATTTTCCGGCCATTTTAACATAATACGTAGTAACAAGC Fajardo-Cavazos P, et al. (1991): PE, promoter mutations, RG
Nicholson WL, et al. (1989): PE RO
SpoVT Positive ND ND ND Bagyan I, et al. (1996): DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CTATAGAGGGCGCGGTTTCCGCGCTCTCTTTATTTTGTCACCC
     >>>>>>>>>>   <<<<<<<<<<
1049988..1050010
21..43
-20.2
sspB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai