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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | sspF |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| sspF | 0.3 kb gene | + | 53183..53368 | sspF-BAC |
| Operon evidence: | Northern blotting (0.3 kb transcript) |
|---|---|
| Reference: | Stephens MA, et al. (1984), Ollington JF & Losick R (1981) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -39:+12 | 53083..53133 | TTTAACGAAAGTTCCATCTGATTTAACAAAAGATAAAACAGTCACATATTA |
Stephens MA, et al. (1984): S1 DP RG DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTGGA >>>>>>>>> <<<<<<<<< |
sspF |
|