Regulated Operon: sspOP

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
sspO cotK - 1926306..1926452

sspO-BAC sspO-BAC  
sspP cotL - 1926128..1926274

 

Operon evidence: lacZ-sspP transcriptional fusion
Reference: Cabrera-Hernandez & Setlow P (2000)
Comments: no transcriptional fusion experiment was performed for the downstream cotM gene


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -41:+8 1926457..1926505 GCTCTCTCATATAACACAATAAAAGAAGCCATATTATGATTGAGGTGAT Cabrera-Hernandez A & Setlow P (2000): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAGCAGACCTTAGTGTCTGTTTTTTTATGCGTTC
     >>>>>      <<<<<
1926106..1926121
7..22
-5.9
sspP

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai