Regulated Operon: tagAB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
tagA
+ 3681370..3682140
COG1922M tagA-STA  
tagB
+ 3682173..3683318
COG1887M  

Operon evidence: Genome analysis
Reference: Mauel C, et al. (1994)
Comments: Integrational plasmids showed that tagC does not belong to the proposed tabAB operon


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PhoP Negative -70:+16 3681225..3681310 GGAAACATATTTAAATTTAATGTAAAGATAATGTTAATCCTTTGTTGAAGATTTATGTTAAAATATAAGGTAGCTTGATTTTGCTT Liu W, et al. (1998): DB FT
PhoP Negative +28:+57 3681322..3681351 CGGTTTTTAACTATATAAATAGAATCTTAA Liu W, et al. (1998): DB FT
PhoP Negative +79:+115 3681375..3681415 AACAGAGACTATTCACAATATTCCTTATGTTAACAGTAACT Liu W, et al. (1998): DB FT
SigA Promoter -42:+5 3681253..3681299 TAATGTTAATCCTTTGTTGAAGATTTATGTTAAAATATAAGGTAGCT Mauel C, et al. (1995): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ATGATGACACTTGTTCAAAACAGAACAAGTGTTCTTTTTTCTATTGAAT
     >>>>>>>>>>>      <<<<<<<<<<<
3683324..3683351
6..33
-17.5
tagB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai