 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | tlpA-mcpA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| tlpA | - | 3208280..3210268 | COG0840NT | mcpA-BAC-2 | ||
| mcpA | - | 3206169..3208154 | COG0840NT | mcpA-BAC-1 mcpA-BAC-2 mcpA-BAC-3 x0462-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Hanlon DW & Ordal GW (1994) |
| Comments: | internal promoter suspected (but not shown experimentally) in front of mcpA |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigD | Promoter | ND | 3210289..3210337 | TTTCAATGTAATTTAAAGGAAGATCCGCCGATATAATTTGTAAATTATT |
Hanlon DW & Ordal GW (1994): HM |
| SigD | Promoter | ND | 3208170..3208221 | TTTTGCTGTATATATTTACCCATTTCCAGCCGATATGAAGGGTAGCATAAAA |
Hanlon DW & Ordal GW (1994): HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CTTAACACCCAAGCTTGTTGCGCTTGGGTGTTTTTTTTAGTTTTT >>>>>>>>> <<<<<<<<< |
mcpA |
|