Regulated Operon: tnrA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
tnrA scgR - 1397411..1397743
COG0789K tnrA-BAC  

Operon evidence: upstream and downstream genes are on the opposite strand
Reference: Genbank U55004
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
TnrA Positive ND 1397808..1397824 TGTTAGAAAATATGACA Robichon D, et al. (2000): DE DP

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TAAAAGTCCGGCTCGCAGTTGAGACGGACTTTTTACGTTTATAA
     >>>>>>>>>      <<<<<<<<<
1397378..1397401
10..33
-12.4
tnrA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai