Regulated Operon: vpr

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
vpr ipa-45r + 3907844..3910264
COG1404O  

Operon evidence: Northern blotting (2.5 kb transcript)
Reference: Sloma A, et al (1991), Presecan E, et al. (1997), Allenby NE, et al. (2005)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
LexA Negative ND 3907649..3907672 GTATACGAACGTATATTCCTAACT Au N, et al. (2005): GS
PhoP Positive ND ND ND Allenby NE, et al. (2005): DB AR NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGCCCTGCCGATTCGGCAGGGCTTTTTAAAGATCAGT
     >>>>>>>>>   <<<<<<<<<
3910271..3910291
7..27
-20.0
vpr

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai