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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | ydjM |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| ydjM | yzvA | + | 679390..679761 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Genbank AB007638 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YycF | Positive | -65:-42 | 679300..679322 | CTTTGTAACATTACTGTAAGGAT |
Bisicchia P, et al. (2007): AR RG GS HM |
| SigA | Promoter | -50:+10 | 679315..679374 | GTAAGGATATTGAAATAAAAAATAGCTGGTTGATCGTGTATAATCTTCCTAGATGTTAAC |
Bisicchia P, et al. (2007): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GGAAAGCAAGAAGTCACATTCTTGCTTTTTCTATTGGTGG >>>>>>> <<<<<<< |
ydjM |
|