Transcription factor: YycF

Factor type	ND
SWISS-PROT	P37478
SubtiList	BG10001
Consensus seq.	TGTWAH-NNNNN-TGTWAH where W = A\|T; H=A\|C\|T
Comment	essential gene; transcribed during exponential growth and shut down at the entry into stationary phase (Spo0A-independent); modulates expression of ftsAZ; similar to two-component response regulator [YycG]
Link to	Phylogenetic profile

Operon	Regulated Gene	Sigma	Regulation	Absolute position	Location	Binding seq.(cis-element)	Experimental evidence
ftsAZ	ftsA	SigA	Positive	`1596377..1596409`	`-70:-38`	TTATTTTTTGTTACACACTTGTAAAGCCACATT	Howell A, et al. (2003): GS FT Fukuchi K, et al. (2000): RG DP GS SDS-PAGE
yocH	yocH	SigA	Positive	`2093853..2093882`	`-80:-51`	TCCTTCATGTAAAGGAACTGTAATCTAAAT	Howell A, et al. (2003): GS FT
ykvT	ykvT	None	Positive	`1448278..1448309`	None	TAACAGGTGTAAATAAAATGTAAAGTACCAAA	Howell A, et al. (2003): HM FT
tagDEF	tagD	SigA	Positive	`3681238..3681268`	`-177:-147`	CAAAGGATTAACATTATCTTTACATTAAATT	Howell A, et al. (2003): HM FT
lytE	lytE	SigA	Positive	`1018879..1018900`	`-57:-34`	ATTTGTCACATGAAGTCAAGAC	Bisicchia P, et al. (2007): AR RG GS HM
yvcE	yvcE	SigA	Positive	`3576015..3576037`	`-65:-42`	GTTTGAAACATAAATGTAATAAA	Bisicchia P, et al. (2007): AR RG GS HM
ydjM	ydjM	SigA	Positive	`679300..679322`	`-65:-42`	CTTTGTAACATTACTGTAAGGAT	Bisicchia P, et al. (2007): AR RG GS HM
yoeB	yoeB	SigA	Negative	`2002565..2002605`	`-38:+3`	TATTGTAATCTATCCGTAATTATTGTAACATTTGTAACATA	Bisicchia P, et al. (2007): AR RG GS HM
yjeA	yjeA	SigA	Negative	`1281022..1281044`	`-5:+17`	AAATGTGAAATAAATGTTACTAC	Bisicchia P, et al. (2007): AR RG GS HM