Regulated Operon: yjdB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yjdB
- 1269733..1270080
COG5492N  

Operon evidence: Northern blotting (0.4 kb transcript)
Reference: Allenby NE, et al. (2005)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PhoP Positive ND 1270144..1270167 ATTATTAACATTTATTTACAAGGA Allenby NE, et al. (2005): DB AR NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ATGCATGAATAAAATAAGGTCCCCCTCTAAAAAGAGAAGGGACCTTATTTTCGCTTCAA
                 >>>>>>>>>>>    <<<<<<<<<<<<
1269657..1269683
50..76
-16.4
yjdB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai