Regulated Operon: yndDEF

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yndD
+ 1907494..1909056

yndD-BAC  
yndE
+ 1909086..1910177

 
yndF
+ 1910167..1911381

 

Operon evidence: Genome analysis
Reference: Wang S, et al. (2006)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -38:+8 1907313..1907358 ACGAACATAAAAAATAGGTATACGGGAAAAATAATCCTATTAGAGA Wang S, et al. (2006): AR, Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
GAATCCCAAGGAAGAGAAGGAAACCTCTCTTCTCTTTTTTATGCATTTA
         >>>>>>>>>>>   <<<<<<<<<<
1911392..1911415
11..34
-13.7
yndF

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai