Regulated Operon: yndL

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yndL
+ 1915221..1915979
COG4195R  

Operon evidence: Northern blotting (transcript longer than 622 nt)
Reference: Silvaggi JM, et al. (2006)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigK Promoter -43:+9 1915081..1915132 AAAATGAGAAGAACAGCGCCCGGGCTAATGGTATATAATATTGTGAATTTAA Silvaggi JM, et al. (2006): PE NB DB
Eichenberger P, et al. (2004): AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AGCTACTGAAAAATAGGAGGCGATAAGACAGCCTCCTATTCCTTATGCTTCTCTTTC
           >>>>>>>>>>         <<<<<<<<<<
1915982..1916010
3..31
-18.2
yndL

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai