Regulated Operon: yodF

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yodF
+ 2130377..2131867
COG0591ER  

Operon evidence: Northern blotting (1.8 kb transcript); upstream and downstream genes are on the opposite strand
Reference: Yoshida K, et al. (2003)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
TnrA Negative ND 2130116..2130132 TGTGATCTTTTCTTACA Yoshida K, et al. (2003): AR HM GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAACCATACGCGGCAGCCGCGTATGGTTTTTTTTACATTTC
     >>>>>>>>>>   <<<<<<<<<<
2131873..2131895
6..28
-18.4
yodF

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai