Regulated Operon: | ypqA |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
ypqA | + | 2337577..2337996 | COG0071O |
Operon evidence: | Genome analysis; upstream and downstream gene are on the opposite strand |
---|---|
Reference: | Genbank L47838 |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
SigE | Promoter | -37:+12 | 2337521..2337569 | TTTATAACAACATCTGGCATAGACGCATAATCTGGTTAAAAAAGGCGGT |
Eichenberger P, et al. (2004): Race-PCR |
SigK | Promoter | -37:+12 | 2337521..2337569 | TTTATAACAACATCTGGCATAGACGCATAATCTGGTTAAAAAAGGCGGT |
Eichenberger P, et al. (2004): Race-PCR |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
CTTTCCAAAAAATAAGCATGAATGAACGATTCATTCATGCTTCTATCATTTAAAA >>>>>>>>>>> <<<<<<<<<<< |
ypqA |
|