 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yraC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yraC | + | 2755987..2756181 | putative gamma-carboxymuconolactone decarboxylase (CMD) |
| Operon evidence: | Nguyen TT, et al. (2009) suggested 64 aa of yraC gene between yraB and adhA, although RefSeq (NC_000964.3) does not include yraC as a CDS. |
|---|---|
| Reference: | Nguyen TT, et al. (2009) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -50:+10 | 2755903..2755962 | TATATTCGGGACTTGCCTTAAAGCACACTTTAAACTCTATACTTCTCCATGCACTAAAAA |
Nguyen TT, et al. (2009): 5' RACE |
| YraB | Positive | -40:+1 | 2755913..2755954 | ACTTGCCTTAAAGCACACTTTAAACTCTATACTTCTCCATGC |
Nguyen TT, et al. (2009): GS DB |
|