Regulated Operon: yrkC

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yrkC
- 2714933..2715493
COG0662G  

Operon evidence: Genome analysis
Reference: Kuwana R, et al. (2002)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigK Promoter -38:+13 2715511..2715561 TTTAGCACACTCCCTTAATAAATGCATAGGATACTATCACAAAAATTTATA Kuwana R, et al. (2002): SDS-PAGE, RG
Eichenberger P, et al. (2004): Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TTGATAAATAAAGCCGATTTAAAATTAAATCGGCTTATTGCTTTATTCG
            >>>>>>>>>    <<<<<<<<<
2714772..2714793
140..161
-13.5
yrkC

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai