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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | ytlI |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| ytlI | + | 3008938..3009864 | COG0583K |
| Operon evidence: | Genome analysis; downstream gene is on the opposite strand |
|---|---|
| Reference: | Lapidus A, et al. (1997), Genbank AF008220 |
| Comments: | The terminator listed in Genbank and SubtiList lacks a T-stretch |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YjbD | Negative | ND | ND | ND |
Erwin KN, et al. (2005): PE RG DB |
| YrzC | Negative | -60:-10 | 3008800..3008850 | TTCACAAAATATATAATTCCTATTTGTTTACTAAGCTTTTATTGTTTATAC |
Burguiere P, et al. (2005): DP Even S, et al. (2006): GS FT AR |
| SigA | Negative | -54:+20 | 3008806..3008879 | AAATATATAATTCCTATTTGTTTACTAAGCTTTTATTGTTTATACTATAAAGCATACTCTGATCTTTGACTAAT |
Burguiere P, et al. (2005): PE |
| SigA | Promoter | -51:+23 | 3008806..3008879 | AAATATATAATTCCTATTTGTTTACTAAGCTTTTATTGTTTATACTATAAAGCATACTCTGATCTTTGACTAAT |
Erwin KN, et al. (2005): PE |
|