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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yvcE |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yvcE | yzkA, yzkA, cwlO | - | 3573393..3574814 |
| Operon evidence: | Terminator prediction |
|---|---|
| Reference: | Bisicchia P, et al. (2007) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YycF | Positive | -65:-42 | 3576015..3576037 | GTTTGAAACATAAATGTAATAAA |
Bisicchia P, et al. (2007): AR RG GS HM |
| SigA | Promoter | -50:+10 | 3575963..3576022 | GTAATAAAATTTATCGCTAATTTGTCGAAACTTGATGGTATAATGATTCTCGTACATAAG |
Bisicchia P, et al. (2007): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAATAAATATGACAAGGGCCTTCTATAAACAGAAGGCTCTTTCTTTATTAACAT >>>>>>>>> <<<<<<<<< |
yvcE |
|