Regulated Operon: yvlABCD

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yvlA
- 3608447..3608773

 
yvlB
- 3607325..3608422
COG3595S  
yvlC
- 3607123..3607320
COG1983KT  
yvlD
- 3606762..3607121
COG1950S  

Operon evidence: Genome analysis
Reference: Huang X, et al. (1999)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
AbrB Negative -79:-55 3608884..3608908 TTAAAATCCAATTTCCGTAAATCGG Qian Q, et al. (2002): RG FT
SigW Promoter -38:+5 3608825..3608867 GAATTTGAAACCTGAAGAGATTTTAAACGTATAAATAAGTAAA Huang X, et al. (1999): S1
Cao M, et al. (2002): AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGCTGCCCGCAAAGGCAGCTTTTTTACATGTGGT
     >>>>>>      <<<<<<
3606739..3606756
6..23
-11.9
yvlD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai