Regulated Operon: yxeD

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yxeD
+ 4066210..4066563

 

Operon evidence: Northern blotting (0.4 kb transcript); downstream gene is on the opposite strand
Reference: Yoshida K, et al. (2000)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -39:+36 4066138..4066212 GACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGATCATTCATG Wang S, et al. (2006): AR, Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TAAAAAGCTCAACACAATGCGAGTGTTGAGCTTTTTTTCTTACTGTT
      >>>>>>>>>       <<<<<<<<<
4066574..4066598
11..35
-13.0
yxeD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai