Regulated Operon: yycCB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yycC
+ 4159577..4159717

 
yycB
+ 4159790..4160998
COG2807P  

Operon evidence: Northern blotting (1.4 kb transcript)
Reference: Yoshida K, et al. (2003)
Comments: Northern blotting results in BSORF show a yycB-yycA transcript and a monocistronic yycB transcript


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
TnrA Negative ND 4159511..4159527 TGTGACATCTTCTTACA Yoshida K, et al. (2003): AR HM GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ATAAAGCGGGGAAGATATCTCCGCTTTTTTCTTTGAATA
     >>>>>>>     <<<<<<<
4161000..4161018
2..20
-12.9
yycB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai