 |
Copyright: Human Genome Center, Inst. Med.
Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Factor type | Unique (CRP/FNR family) |
|---|---|
| SWISS-PROT | ND |
| SubtiList | ND |
| Consensus seq. | TGTGA------TCACA |
| Comment | same binding consensus with E. coli CAP exists in the narK-fnr operon |
| Link to | Phylogenetic profile, Weight matrix & Motif alignment |
| Operon | Regulated Gene | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|---|---|
| arfM | arfM | SigA | Positive | 3830671..3830694 | -52:-29 | AGGCTGTGAAATACATCACTGCTG |
Marino M, et al. (2001): RG SDM DB Cruz Ramos H, et al. (1995): HM Reents H, et al. (2006): AR |
| hemZ | hemZ | SigA | Positive | ND | ND | ND |
Homuth G, et al. (1999): RG |
| narGHJI | narG | SigA | Positive | 3830001..3830030 | -53:-24 | AGTGTGTGACATAGTTCACAAGGAAACACG |
Cruz Ramos H, et al. (1995): DB PE Reents H, et al. (2006): DB NB AR RG SDM |
| narK-fnr | narK | SigA | Positive | 3833576..3833597 | -52:-31 | ACGTGTGATGTAATTCACAATC |
Cruz Ramos H, et al. (1995): DB PE Reents H, et al. (2006): AR |
|