 |
Copyright: Human Genome Center, Inst. Med.
Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Factor type | LysR |
|---|---|
| SWISS-PROT | ND |
| SubtiList | ND |
| Consensus seq. | ATCTCANNNTGAGAT, ATCTAANNNATATAT |
| Comment | Like many members of LysR family, GltC is encoded just upstream of and in the opposite orientation to its target genes (gltAB); it negatively autoregulates itself. The binding site for the autoregulation is the same with the box I of gltA (-71:-57) in its genome position. Box II of gltA overlaps with its -35 region. cf. GltR |
| Link to | Phylogenetic profile, Weight matrix & Motif alignment |
| Operon | Regulated Gene | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|---|---|
| gltAB | gltA | SigA | Positive | 2014669..2014778 | -90:+20 | GTTTGTCTCACATCCATCTATCTCATTTTGAGATTCTTTTGATCTAAATTATATATTGTTTATATCGTTTTGAAAACCTACAATGATTATAGAGTTGTTAGATTTTATGA |
Belitsky BR, et al. (1995): SDM DP Piccossi S, et al. (2007): FP Commichau FM, et al. (2007): RG, in vivo protein interaction assay Bohannon DE, et al. (1989): S1 |
| gltC | gltC | SigA | Negative | 2014745..2014759 | +5:+19 | ATCTCAAAATGAGAT |
Belitsky BR, et al. (1995): SDM DP Bohannon DE, et al. (1989): S1 |
|