 |
Copyright: Human Genome Center, Inst. Med.
Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Factor type | DeoR |
|---|---|
| SWISS-PROT | ND |
| SubtiList | ND |
| Consensus seq. | WRAYCAADARDWRAYCAADARD |
| Comment | a negative regulator (presumably a repressor) which exists immediately upstream of the iol operon in the opposite direction |
| Link to | Phylogenetic profile, Weight matrix & Motif alignment |
| Operon | Regulated Gene | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|---|---|
| iolRS | iolR | SigA | Negative | 4084676..4084727 | -94:-43 | AGAAGGCCGTCCAATCTTGCAAAAGATATACACCGATGTTATCATTTTTAAG |
Yoshida KI, et al. (1997): DB DP HB |
| iolRS | iolR | SigA | Negative | 4084730..4084751 | -40:-19 | ACTATTGATTAACTTTTGGTTT |
Yoshida KI, et al. (1999): GS FT |
| ydjK | ydjK | SigA | Negative | 676152..676240 | -2:+87 | TCAGATATAACAAAAATGTCACTATAACATCACTACAATTGAACTATTAAGTGACTAATAAATACCAAATGAACGAGGTTATGCACAAA |
Yoshida K, et al. (2002): NB PE FT |
| mmsA-iolBCDEF-idh-iolHI-fbaB | mmsA | SigA | Negative | 4084619..4084681 | -107:-45 | CCTTCTCTTACTTCTCTTACTTGATTAAAAGATTAATATAATAAAAATAATGAAAAAATGTAG |
Yoshida KI, et al. (1997): DB DP HB |
| mmsA-iolBCDEF-idh-iolHI-fbaB | mmsA | SigA | Negative | 4084558..4084579 | -5:+17 | TAACCAAGAAATGACCAAAAAG |
Yoshida KI, et al. (1999): GS FT |
|