Transcription factor: YrkP

Factor type OmpR response regulator family
SWISS-PROT ND
SubtiList ND
Consensus seq. [T/G]TCA[T/C]AAATT
Comment None
Link to Phylogenetic profile

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
yrkO yrkO None Positive 2705219..2705246 -114:-86 CGTAAATCTTAACAATTTATGAAAGCTG Ogura M, et al. (2008): GS FT RG
yrkO yrkO None Positive 2705251..2705288 -82:-45 TCGCCACAAATTTGTCACATTTTCTAAAAAAAATGATG Ogura M, et al. (2008): GS FT RG
yrkO yrkO None Positive 2705292..2705315 -41:-18 CTTCATAAATTGTTAAGATTCGGT Ogura M, et al. (2008): GS FT RG
yrkN yrkN None Positive 2706827..2706917 -300:-212 ACTATTTTTGTAACTTTTCGCAGGAAAAATTCGAGAATGATGACAAATCCCGCATACGACACTTAATACGGTAGTGAACAATAGTAAATTA Ogura M, et al. (2008): GS FT RG
ykcBC ykcB None Positive 1354185..1354284 -100:-1 GGAATGGCCTCGGCAAAAATATTGTCTTTGTTTATTAATAGTTTATTCATATTTGCTTGTTACACTATTTCAAAGTTAGACAAAAAGGAGTGAAAAATAA Ogura M, et al. (2008): GS FT




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai