We scaned AbrB binding sites at upstream reagion of the ortholog genes by PSSM.
| Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
|---|
| AbrB | abrB | Bsu | -87..-98 | GGTTTCCAATAA | 10.5 |
|---|
| AbrB | abrB | Cac | -18..-29 | ATTTTACATAAA | 11.4 |
|---|
| AbrB | aprE | Bsu | -165..-176 | ATGTCACAAAAA | 11 |
|---|
| AbrB | aprE | Bha | -12..-23 | CTTTCACAGAAA | 9 |
|---|
| AbrB | aprE | Xfa | -88..-99 | ATTTGACATAAT | 9.1 |
|---|
| AbrB | aprE | Nos | -287..-298 | GTTTACCAAAAA | 11.6 |
|---|
| AbrB | aprE | Dra | -81..-92 | ATTTGACAAAAA | 12.5 |
|---|
| AbrB | citB | Fnu | -43..-54 | ATTTTCTAAAAA | 10.3 |
|---|
| AbrB | comK | Bsu | -55..-66 | GTTTTACAAAAA | 11.8 |
|---|
| AbrB | ftsA | Bsu | -83..-94 | GTGTAACAAAAA | 9.9 |
|---|
| AbrB | ftsA | Spy | -115..-126 | ATATAACAAAAA | 9.8 |
|---|
| AbrB | ftsA | Rpr | -54..-65 | AATTCACAAAAA | 10 |
|---|
| AbrB | hpr | Bsu | -100..-111 | ATTTTACACAAA | 9 |
|---|
| AbrB | hpr | Cac | -58..-69 | ATTTGACAAAAA | 12.5 |
|---|
| AbrB | hpr | Lla | -98..-109 | ATTTTAAAAAAA | 9.5 |
|---|
| AbrB | hpr | Spn | -45..-56 | ATTTGACAGAAA | 10.1 |
|---|
| AbrB | hpr | Sau | -170..-181 | ATTTCCCATAAA | 11.5 |
|---|
| AbrB | hpr | Lin | -218..-229 | ATTTCTCAAAAA | 10.8 |
|---|
| AbrB | hpr | Cgl | -138..-149 | ATTTTCCAATAA | 12.3 |
|---|
| AbrB | hpr | Eco | -67..-78 | GTTTTAGAAAAA | 9.2 |
|---|
| AbrB | hpr | EcZ | -67..-78 | GTTTTAGAAAAA | 9.2 |
|---|
| AbrB | hpr | Ecs | -67..-78 | GTTTTAGAAAAA | 9.2 |
|---|
| AbrB | hpr | Ype | -249..-260 | CATTGGCAAAAA | 9.1 |
|---|
| AbrB | hpr | Sty | -101..-112 | AGTTACCAACAA | 9.7 |
|---|
| AbrB | hpr | Hin | -43..-54 | ATTTTACAAAAA | 12.6 |
|---|
| AbrB | hpr | Pmu | -224..-235 | CATTTGCAAAAA | 9.2 |
|---|
| AbrB | hpr | Atu | -155..-166 | ATTTGTCAATAA | 10.3 |
|---|
| AbrB | hpr | Bme | -50..-61 | ATTTTACAAAAT | 10.4 |
|---|
| AbrB | hpr | Ccr | -55..-66 | CGTTCCCAATAA | 10.1 |
|---|
| AbrB | hpr | Syn | -35..-46 | ATTGGCCAAAAA | 11.2 |
|---|
| AbrB | hpr | Fnu | -107..-118 | AATTTACAATAA | 9.6 |
|---|
| AbrB | hpr | Bsu | -100..-111 | ATTTTACACAAA | 9 |
|---|
| AbrB | hpr | Cac | -58..-69 | ATTTGACAAAAA | 12.5 |
|---|
| AbrB | hpr | Lla | -98..-109 | ATTTTAAAAAAA | 9.5 |
|---|
| AbrB | hpr | Spn | -45..-56 | ATTTGACAGAAA | 10.1 |
|---|
| AbrB | hpr | Sau | -170..-181 | ATTTCCCATAAA | 11.5 |
|---|
| AbrB | hpr | Lin | -218..-229 | ATTTCTCAAAAA | 10.8 |
|---|
| AbrB | hpr | Cgl | -138..-149 | ATTTTCCAATAA | 12.3 |
|---|
| AbrB | hpr | Eco | -67..-78 | GTTTTAGAAAAA | 9.2 |
|---|
| AbrB | hpr | EcZ | -67..-78 | GTTTTAGAAAAA | 9.2 |
|---|
| AbrB | hpr | Ecs | -67..-78 | GTTTTAGAAAAA | 9.2 |
|---|
| AbrB | hpr | Ype | -249..-260 | CATTGGCAAAAA | 9.1 |
|---|
| AbrB | hpr | Sty | -101..-112 | AGTTACCAACAA | 9.7 |
|---|
| AbrB | hpr | Atu | -155..-166 | ATTTGTCAATAA | 10.3 |
|---|
| AbrB | hpr | Bme | -50..-61 | ATTTTACAAAAT | 10.4 |
|---|
| AbrB | hpr | Ccr | -55..-66 | CGTTCCCAATAA | 10.1 |
|---|
| AbrB | hpr | Fnu | -107..-118 | AATTTACAATAA | 9.6 |
|---|
| AbrB | kinB | Bsu | -92..-103 | CTTTTTCAATAA | 9.9 |
|---|
| AbrB | kinB | Cac | -14..-25 | ATTTTATAAAAA | 9.5 |
|---|
| AbrB | kinB | Lla | -38..-49 | AATTAACAAAAA | 9.7 |
|---|
| AbrB | kinB | Spy | -148..-159 | ATTTGACAATAA | 11.4 |
|---|
| AbrB | kinB | Sau | -57..-68 | AATTACCAAAAA | 10.5 |
|---|
| AbrB | kinB | Eco | -200..-211 | CTGTGCCAATAA | 10.8 |
|---|
| AbrB | kinB | EcZ | -200..-211 | CTGTGCCAATAA | 10.8 |
|---|
| AbrB | kinB | Ecs | -200..-211 | CTGTGCCAATAA | 10.8 |
|---|
| AbrB | kinB | Ype | -210..-221 | CTTTGTCAATAA | 9.8 |
|---|
| AbrB | kinB | Sty | -54..-65 | CGTTGACAATAA | 9.9 |
|---|
| AbrB | kinB | Mlo | -24..-35 | ATTTTCCATAAT | 10 |
|---|
| AbrB | kinB | Syn | -23..-34 | AGGTGGCAAAAA | 9.6 |
|---|
| AbrB | kinB | Nos | -185..-196 | GTTTTACAAAAA | 11.8 |
|---|
| AbrB | kinB | Aae | -198..-209 | CTTTTTCAAAAA | 11 |
|---|
| AbrB | pbpE | Bsu | -100..-111 | ATTTTGCAAAAA | 11.6 |
|---|
| AbrB | pbpE | Lla | -60..-71 | ATTTTAAAAAAA | 9.5 |
|---|
| AbrB | pbpE | Hin | -46..-57 | ATTTTAGAAAAA | 10 |
|---|
| AbrB | pbpE | Mlo | -18..-29 | CGTTTCCAACAA | 10.2 |
|---|
| AbrB | pbpE | Syn | -14..-25 | AATTTGCAAAAA | 9.7 |
|---|
| AbrB | rbsR | Bsu | -138..-149 | CTTTGTCAAAAA | 10.9 |
|---|
| AbrB | rbsR | Bha | -125..-136 | CTTGTCCAAAAA | 10.8 |
|---|
| AbrB | rbsR | Cac | -56..-67 | AATTGACAAAAA | 10.6 |
|---|
| AbrB | rbsR | Lla | -80..-91 | ATTTGGCAAAAT | 9.3 |
|---|
| AbrB | rbsR | Spy | -88..-99 | CTTTTTCAAAAA | 11 |
|---|
| AbrB | rbsR | Lin | -178..-189 | CGTTACCAAAAA | 10.9 |
|---|
| AbrB | rbsR | Atu | -4..-15 | AATTGGCAAAAA | 9.6 |
|---|
| AbrB | sigW | Bsu | -18..-29 | ATTTGCCAAAAA | 13.3 |
|---|
| AbrB | sigW | Bha | -120..-131 | CTTTAGCAAAAA | 10.1 |
|---|
| AbrB | sigW | Pae | -59..-70 | ATCTCACAAAAA | 9.6 |
|---|
| AbrB | sigW | Pmu | -69..-80 | CATTGACAAAAA | 10.1 |
|---|
| AbrB | sigW | Rso | -33..-44 | AAGTCACAAAAA | 9.1 |
|---|
| AbrB | sigW | Mlo | -53..-64 | GTTTACCAAAAA | 11.6 |
|---|
| AbrB | sigW | Syn | -170..-181 | ATATTGCAAAAA | 9.8 |
|---|
| AbrB | spoVG | Bsu | -56..-67 | ATTTCAGAAAAA | 9.3 |
|---|
| AbrB | spoVG | Bha | -88..-99 | AATTCACAAAAA | 10 |
|---|
position : counted from translation start site.