We scaned CcpA binding sites at upstream reagion of the ortholog genes by PSSM.
| Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
|---|
| CcpA | ackA | Bsu | -144..-156 | TGTAAGCGTTATC | 17.2 |
|---|
| CcpA | ackA | Bha | -156..-168 | TGAAACCGCTTTT | 10.1 |
|---|
| CcpA | ackA | Lla | -17..-29 | TGTATGCGTTTTA | 12.5 |
|---|
| CcpA | ackA | Spy | -15..-27 | TGAAATCGTTTTC | 13.5 |
|---|
| CcpA | ackA | Spn | -18..-30 | TGAAAACGCTTAA | 13.7 |
|---|
| CcpA | ackA | Vch | -31..-43 | GGGAAGCGTTTTC | 12.6 |
|---|
| CcpA | ackA | Bme | -159..-171 | TGAAAGCGCATAG | 10.6 |
|---|
| CcpA | ackA | Nos | -103..-115 | TGGAAACGGTTCA | 11.6 |
|---|
| CcpA | acoA | Bha | -242..-254 | TGTAAGCGCTTTA | 16.1 |
|---|
| CcpA | acoA | Spy | -67..-79 | AGAAAGCGATTTA | 10.2 |
|---|
| CcpA | acoA | Bme | -217..-229 | TGAAAGCCGTTCC | 11.7 |
|---|
| CcpA | acoR | Bsu | -55..-67 | TGAAAGCGCTTTA | 16.6 |
|---|
| CcpA | acoR | Bha | -105..-117 | TGTTAGCGCTTTC | 15 |
|---|
| CcpA | acsA | Bsu | -88..-100 | TGAAAACGCTTTA | 14.7 |
|---|
| CcpA | acsA | Bha | -92..-104 | TGTAAGCGCTACC | 16.1 |
|---|
| CcpA | acsA | Lla | -65..-77 | TGTAAATGTTTTC | 10.6 |
|---|
| CcpA | acsA | Dra | -83..-95 | TGAAAGCGTCGCC | 11.1 |
|---|
| CcpA | alsS | Bha | -103..-115 | AGAAAGCGTTTTT | 10.6 |
|---|
| CcpA | alsS | Spn | -56..-68 | TGGAAACGTTCTC | 12.6 |
|---|
| CcpA | alsS | Eco | -22..-34 | TGATAACGGTAAC | 11.5 |
|---|
| CcpA | alsS | EcZ | -22..-34 | TGATAACGGTAAC | 11.5 |
|---|
| CcpA | alsS | Ecs | -22..-34 | TGATAACGGTAAC | 11.5 |
|---|
| CcpA | alsS | Pmu | -275..-287 | TGAAAACGTTTTC | 16.6 |
|---|
| CcpA | alsS | Dra | -199..-211 | TGAAAGCGTTACC | 16.1 |
|---|
| CcpA | amyE | Bsu | -113..-125 | TGTAAGCGTTAAC | 16.2 |
|---|
| CcpA | amyE | Bha | -42..-54 | TGTAAACGTTTAA | 12.7 |
|---|
| CcpA | amyE | Lla | -155..-167 | TGAAAGCGTTATG | 12.6 |
|---|
| CcpA | amyE | Spn | -60..-72 | TGCAAGCGTTTGC | 13.4 |
|---|
| CcpA | amyE | Lin | -50..-62 | AGAAAGCGCTTTC | 15 |
|---|
| CcpA | amyE | Sty | -220..-232 | TGAAAACGATTTT | 10.8 |
|---|
| CcpA | amyE | Ccr | -270..-282 | TGCAAACGATGAC | 10.2 |
|---|
| CcpA | amyE | Dra | -29..-41 | TGGAAGCGCTTCA | 13.8 |
|---|
| CcpA | araA | Bsu | -26..-38 | TGAAAGCGTTTTA | 16.1 |
|---|
| CcpA | araB | Ype | -204..-216 | TGATAGCGCTCTA | 10.3 |
|---|
| CcpA | araE | Bsu | -160..-172 | TGGAAGCGATTTC | 15.4 |
|---|
| CcpA | araE | Bha | -251..-263 | TGAAAACGGATAC | 13.5 |
|---|
| CcpA | araE | Cac | -137..-149 | TGAAAGCGATTAC | 15.6 |
|---|
| CcpA | araE | Lla | -61..-73 | GGAAAGCGGTATC | 13.2 |
|---|
| CcpA | araE | Spy | -120..-132 | TGAAAACGCTTGA | 11.8 |
|---|
| CcpA | araE | Spn | -99..-111 | TAAAAACGCTTTC | 11.6 |
|---|
| CcpA | araE | Sau | -58..-70 | TGAATGCGCTATC | 15.1 |
|---|
| CcpA | araE | Lin | -122..-134 | TGTAAGCGATAAA | 11.9 |
|---|
| CcpA | araE | Cgl | -272..-284 | TTTAAGCGCTTCC | 11.4 |
|---|
| CcpA | araE | Mtu | -111..-123 | TGGAAGCGCGTTA | 10.9 |
|---|
| CcpA | araE | MtC | -78..-90 | TGGAAGCGCGTTA | 10.9 |
|---|
| CcpA | araE | Eco | -86..-98 | TGTAAGCGATTAC | 15.1 |
|---|
| CcpA | araE | EcZ | -86..-98 | TGTAAGCGATTAC | 15.1 |
|---|
| CcpA | araE | Ecs | -86..-98 | TGTAAGCGATTAC | 15.1 |
|---|
| CcpA | araE | Ype | -8..-20 | TGGATGCGATTTC | 12.3 |
|---|
| CcpA | araE | Sty | -117..-129 | TGATAGCGCTATC | 14.7 |
|---|
| CcpA | araE | Pae | -88..-100 | TCAAAGCGCTATC | 12.7 |
|---|
| CcpA | araE | Nme | -234..-246 | GGTAAGCGTTTAC | 12.3 |
|---|
| CcpA | araE | NmA | -98..-110 | GGTAAGCGTTTAC | 12.3 |
|---|
| CcpA | araE | Rso | -64..-76 | TGAAATCGGTTTA | 11.3 |
|---|
| CcpA | araE | Ccr | -74..-86 | TGAAAGCGCTGCC | 16.1 |
|---|
| CcpA | bglP | Bsu | -139..-151 | TGAAAGCGTATTC | 16.2 |
|---|
| CcpA | bglP | Bha | -216..-228 | TGAAAGCGTTGAC | 16.2 |
|---|
| CcpA | bglP | Cac | -232..-244 | TGTAAACGGTATC | 15.5 |
|---|
| CcpA | bglP | Lla | -60..-72 | TGAAAACGTTTTT | 12.7 |
|---|
| CcpA | bglP | Spy | -198..-210 | TGAAAACGCTTGA | 11.8 |
|---|
| CcpA | bglP | Spn | -40..-52 | TGCAAACGTTTTC | 14.4 |
|---|
| CcpA | bglP | Lin | -65..-77 | TGAAAGCGCAACC | 14.3 |
|---|
| CcpA | bglP | Eco | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | EcZ | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | Ecs | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | Pmu | -46..-58 | AGTAAACGTTTTC | 12.1 |
|---|
| CcpA | bglP | Bsu | -139..-151 | TGAAAGCGTATTC | 16.2 |
|---|
| CcpA | bglP | Bha | -216..-228 | TGAAAGCGTTGAC | 16.2 |
|---|
| CcpA | bglP | Cac | -232..-244 | TGTAAACGGTATC | 15.5 |
|---|
| CcpA | bglP | Lla | -60..-72 | TGAAAACGTTTTT | 12.7 |
|---|
| CcpA | bglP | Spy | -198..-210 | TGAAAACGCTTGA | 11.8 |
|---|
| CcpA | bglP | Spn | -40..-52 | TGCAAACGTTTTC | 14.4 |
|---|
| CcpA | bglP | Lin | -65..-77 | TGAAAGCGCAACC | 14.3 |
|---|
| CcpA | bglP | Eco | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | EcZ | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | Ecs | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | Pmu | -46..-58 | AGTAAACGTTTTC | 12.1 |
|---|
| CcpA | bglP | Bsu | -139..-151 | TGAAAGCGTATTC | 16.2 |
|---|
| CcpA | bglP | Bha | -216..-228 | TGAAAGCGTTGAC | 16.2 |
|---|
| CcpA | bglP | Cac | -232..-244 | TGTAAACGGTATC | 15.5 |
|---|
| CcpA | bglP | Lla | -60..-72 | TGAAAACGTTTTT | 12.7 |
|---|
| CcpA | bglP | Spy | -198..-210 | TGAAAACGCTTGA | 11.8 |
|---|
| CcpA | bglP | Spn | -40..-52 | TGCAAACGTTTTC | 14.4 |
|---|
| CcpA | bglP | Lin | -65..-77 | TGAAAGCGCAACC | 14.3 |
|---|
| CcpA | bglP | Eco | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | EcZ | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | Ecs | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | bglP | Pmu | -46..-58 | AGTAAACGTTTTC | 12.1 |
|---|
| CcpA | bglS | Bsu | -21..-33 | TGAAAGCGTTTTC | 18.5 |
|---|
| CcpA | bglS | Bha | -115..-127 | TGAAAGCGCTTTC | 19 |
|---|
| CcpA | bglS | Mlo | -49..-61 | TGGAAGCGGTTCA | 13.5 |
|---|
| CcpA | citM | Bsu | -34..-46 | TGGAAGCGCTTAC | 16.8 |
|---|
| CcpA | citM | Bha | -44..-56 | TGAAAGCGCTTAA | 15.6 |
|---|
| CcpA | citM | Spy | -39..-51 | TGAAAGCGCTTAT | 14.1 |
|---|
| CcpA | citZ | Bsu | -102..-114 | TGTAAGCATTTTC | 13.3 |
|---|
| CcpA | citZ | Nme | -74..-86 | TGAAAGCGGTAAA | 14.5 |
|---|
| CcpA | citZ | NmA | -74..-86 | TGAAAGCGGTAAA | 14.5 |
|---|
| CcpA | dra | Spn | -34..-46 | TGTAAACGATTTA | 11.8 |
|---|
| CcpA | glpF | Bha | -146..-158 | TGTAAACGCTGTC | 15.3 |
|---|
| CcpA | glpF | Spn | -127..-139 | TGTAAGCGTTTTT | 14.1 |
|---|
| CcpA | glpF | Lin | -200..-212 | TGACAGCGTTTTC | 13.8 |
|---|
| CcpA | gntR | Bsu | -68..-80 | TGCAAACACTTTC | 10.2 |
|---|
| CcpA | gntR | Lla | -85..-97 | TGACAACGGTTTC | 12.1 |
|---|
| CcpA | gntR | Sty | -217..-229 | TGGAAGCATTTAC | 11.6 |
|---|
| CcpA | gntR | Nme | -16..-28 | TGAAAGCGTAAAA | 12 |
|---|
| CcpA | gntR | NmA | -16..-28 | TGAAAGCGTAAAA | 12 |
|---|
| CcpA | gntR | Mlo | -44..-56 | TGAAAACGTATAA | 10.9 |
|---|
| CcpA | gntR | Ccr | -200..-212 | TGCAAGCGCTCGC | 11.1 |
|---|
| CcpA | iolB | Bha | -130..-142 | TGAAAGCGCTTTT | 15.1 |
|---|
| CcpA | lcfA | Bsu | -29..-41 | TGTAAACGCTTTC | 16.6 |
|---|
| CcpA | lcfA | Bha | -92..-104 | TGTAAGCGCTACC | 16.1 |
|---|
| CcpA | lcfA | Mtu | -43..-55 | TGAAAGCGGCAGC | 10.5 |
|---|
| CcpA | lcfA | MtC | -154..-166 | TGAAAGCGGCAGC | 10.5 |
|---|
| CcpA | lcfA | Nme | -45..-57 | TGAAAACCGTTTC | 11.4 |
|---|
| CcpA | lcfA | NmA | -45..-57 | TGAAAACCGTTTC | 11.4 |
|---|
| CcpA | lcfA | Ccr | -12..-24 | TGAAAACGCAAAA | 10.6 |
|---|
| CcpA | lcfA | Nos | -271..-283 | TGTAAGCATTTAC | 12.3 |
|---|
| CcpA | levD | Bsu | -68..-80 | TGAAAACGCTTAA | 13.7 |
|---|
| CcpA | levD | Spy | -119..-131 | TGAAAACGTTTTA | 14.2 |
|---|
| CcpA | levD | Spn | -25..-37 | TGAAAGCGCAAAC | 14.9 |
|---|
| CcpA | levD | Lin | -173..-185 | TGCAAGCGTTTTC | 16.3 |
|---|
| CcpA | licB | Bsu | -65..-77 | TGAAAGCGATTTC | 16.6 |
|---|
| CcpA | licB | Bha | -24..-36 | TGAAAGCGCTTAT | 14.1 |
|---|
| CcpA | licB | Lla | -80..-92 | TGCAAGCGTTATC | 15.5 |
|---|
| CcpA | licB | Spn | -78..-90 | TGGAAACGCTTTA | 13.5 |
|---|
| CcpA | licB | Lin | -62..-74 | TGTAAACGGTTTC | 16.3 |
|---|
| CcpA | mmgA | Bsu | -25..-37 | TGTAAGCGCTGTC | 17.2 |
|---|
| CcpA | mmgA | Bha | -53..-65 | TGTAAGCGCTTAA | 15.1 |
|---|
| CcpA | mmgA | Spy | -25..-37 | TGTAAGCGTTTCA | 14 |
|---|
| CcpA | mmgA | Pae | -17..-29 | TGGAATCGTTTAC | 11.3 |
|---|
| CcpA | mmgA | Rso | -34..-46 | GGGAAGCGCTGTC | 11.8 |
|---|
| CcpA | mmgA | Ccr | -195..-207 | TAGAAGCGGTTAC | 11 |
|---|
| CcpA | msmX | Bsu | -22..-34 | TGTAAACGCTTTC | 16.6 |
|---|
| CcpA | msmX | Bha | -106..-118 | TGAAAGCGTTTTA | 16.1 |
|---|
| CcpA | msmX | Lla | -44..-56 | TGTAAACGTTTTC | 16.1 |
|---|
| CcpA | msmX | Spy | -93..-105 | TGAAAGCGCTATT | 14.3 |
|---|
| CcpA | msmX | Spn | -42..-54 | TGAAAACGCTTTA | 14.7 |
|---|
| CcpA | msmX | Lin | -46..-58 | TGAAAACGCTTTA | 14.7 |
|---|
| CcpA | msmX | Vch | -232..-244 | TGAAAGCGTTACG | 11 |
|---|
| CcpA | msmX | Atu | -169..-181 | TGAAAACATTTTC | 11.9 |
|---|
| CcpA | msmX | Mlo | -73..-85 | TGCAAGCGGATTA | 11.8 |
|---|
| CcpA | pta | Bsu | -88..-100 | TGAAAGCGCTATA | 15.8 |
|---|
| CcpA | pta | Bha | -122..-134 | TGTAAGCGCTTTA | 16.1 |
|---|
| CcpA | pta | Spn | -94..-106 | TGAAAGCGGATTT | 12.5 |
|---|
| CcpA | pta | Syn | -131..-143 | TAAAAGCGCTATC | 12.7 |
|---|
| CcpA | rbsR | Bsu | -22..-34 | TGTAAACGGTTAC | 15.3 |
|---|
| CcpA | rbsR | Bha | -83..-95 | TGAAAACGCTTAC | 16.1 |
|---|
| CcpA | rbsR | Cac | -247..-259 | TGTTAACGTTAAC | 10.8 |
|---|
| CcpA | rbsR | Lla | -52..-64 | TGAAAACGGATAC | 13.5 |
|---|
| CcpA | rbsR | Spy | -192..-204 | TGCAAGCGGTTGC | 13.6 |
|---|
| CcpA | rbsR | Spn | -114..-126 | TGTAATCGTTTTC | 13 |
|---|
| CcpA | rbsR | Lin | -144..-156 | TGATAGCGCTTTC | 15.5 |
|---|
| CcpA | rbsR | Eco | -18..-30 | TGTAAGCGTTTAC | 17 |
|---|
| CcpA | rbsR | EcZ | -18..-30 | TGTAAGCGTTTAC | 17 |
|---|
| CcpA | rbsR | Ecs | -18..-30 | TGTAAGCGTTTAC | 17 |
|---|
| CcpA | rbsR | Ype | -23..-35 | TGTAAGCGGTTAC | 17.2 |
|---|
| CcpA | rbsR | Pae | -73..-85 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | rbsR | Hin | -64..-76 | TGAAAGCGGTTAC | 17.7 |
|---|
| CcpA | rbsR | Pmu | -195..-207 | TGAAAACGGTTAC | 15.8 |
|---|
| CcpA | rbsR | Xfa | -27..-39 | TGAAAACCGTTTC | 11.4 |
|---|
| CcpA | rbsR | Rso | -24..-36 | TGTAAACGTTTAC | 15.1 |
|---|
| CcpA | rbsR | Atu | -63..-75 | TGAAAACGATTTC | 14.7 |
|---|
| CcpA | rbsR | Sme | -119..-131 | CGCAAGCGCTTCC | 10.5 |
|---|
| CcpA | rbsR | Bme | -112..-124 | TGAAAGCGGTTTG | 13.6 |
|---|
| CcpA | rbsR | Mlo | -127..-139 | TGAAAACGATTTC | 14.7 |
|---|
| CcpA | rbsR | Ccr | -83..-95 | TGAAAGCGCTGCC | 16.1 |
|---|
| CcpA | rbsR | Tma | -16..-28 | TGTAAGCGCTTAC | 17.5 |
|---|
| CcpA | treP | Bsu | -139..-151 | TGAAAGCGTATTC | 16.2 |
|---|
| CcpA | treP | Bha | -216..-228 | TGAAAGCGTTGAC | 16.2 |
|---|
| CcpA | treP | Cac | -175..-187 | TGTAAACGGTATC | 15.5 |
|---|
| CcpA | treP | Spy | -198..-210 | TGAAAACGCTTGA | 11.8 |
|---|
| CcpA | treP | Spn | -40..-52 | TGCAAACGTTTTC | 14.4 |
|---|
| CcpA | treP | Lin | -65..-77 | TGAAAGCGCAACC | 14.3 |
|---|
| CcpA | treP | Eco | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | treP | EcZ | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | treP | Ecs | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | treP | Pmu | -46..-58 | AGTAAACGTTTTC | 12.1 |
|---|
| CcpA | treP | Bsu | -139..-151 | TGAAAGCGTATTC | 16.2 |
|---|
| CcpA | treP | Bha | -216..-228 | TGAAAGCGTTGAC | 16.2 |
|---|
| CcpA | treP | Cac | -175..-187 | TGTAAACGGTATC | 15.5 |
|---|
| CcpA | treP | Spy | -198..-210 | TGAAAACGCTTGA | 11.8 |
|---|
| CcpA | treP | Spn | -40..-52 | TGCAAACGTTTTC | 14.4 |
|---|
| CcpA | treP | Lin | -65..-77 | TGAAAGCGCAACC | 14.3 |
|---|
| CcpA | treP | Eco | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | treP | EcZ | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | treP | Ecs | -87..-99 | TGAAACCGGTTTC | 13.7 |
|---|
| CcpA | treP | Pmu | -46..-58 | AGTAAACGTTTTC | 12.1 |
|---|
| CcpA | xylA | Bha | -20..-32 | AGTAAGCGTTATC | 13.2 |
|---|
| CcpA | xylA | Mtu | -98..-110 | GGTAAACGCTAAC | 10.1 |
|---|
| CcpA | xylA | MtC | -23..-35 | GGTAAACGCTAAC | 10.1 |
|---|
| CcpA | ydbH | Bsu | -92..-104 | TGAAAGCGCTGTC | 17.7 |
|---|
| CcpA | ydbH | Bha | -193..-205 | TGTAAGCCTTGTC | 11.3 |
|---|
| CcpA | ydbH | Rso | -46..-58 | TGAAAGCGCTGGC | 14.8 |
|---|
| CcpA | ydbH | Sme | -135..-147 | TGTTAGCGCATAC | 11.7 |
|---|
| CcpA | ydbH | Mlo | -90..-102 | TGCAAGCGCTGTG | 10.4 |
|---|
| CcpA | ydhO | Bsu | -67..-79 | TGTAAGCGTTTTC | 18 |
|---|
| CcpA | ydhO | Lla | -245..-257 | AGAAAGCGGTTTC | 14.7 |
|---|
| CcpA | ydhO | Spn | -50..-62 | AGAAAGCGTTGTC | 13.2 |
|---|
| CcpA | ydhO | Lin | -62..-74 | TGTAAACGGTTTC | 16.3 |
|---|
| CcpA | yjmA | Bsu | -111..-123 | TGACAGCGTTAAC | 12 |
|---|
| CcpA | yjmA | Cac | -42..-54 | TGGTAACGTTATC | 11.1 |
|---|
| CcpA | yxjC | Bsu | -73..-85 | TGAAAGCGCTTTC | 19 |
|---|
| CcpA | yxjC | Cac | -20..-32 | AGAAAACGTTACC | 10.2 |
|---|
| CcpA | yxkJ | Bsu | -40..-52 | TGTTAACGCTTTC | 13.1 |
|---|
| CcpA | yxkJ | Sty | -60..-72 | TGAAAACGCCTTA | 10.2 |
|---|
position : counted from translation start site.