We scaned GltC binding sites at upstream reagion of the ortholog genes by PSSM.
Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
---|
GltC | gltA | Bsu | -114..-128 | ATCTCATTTTGAGAT | 19.8 |
GltC | gltA | Lla | -82..-96 | ATTACATTTATATAT | 9.7 |
GltC | gltA | Lin | -165..-179 | ATCTCATTTCGAGAA | 14.7 |
GltC | gltA | Ype | -125..-139 | ATCTCATGCTTATAT | 11.2 |
GltC | gltA | Bsu | -114..-128 | ATCTCATTTTGAGAT | 19.8 |
GltC | gltA | Lla | -82..-96 | ATTACATTTATATAT | 9.7 |
GltC | gltA | Lin | -165..-179 | ATCTCATTTCGAGAA | 14.7 |
GltC | gltA | Ype | -125..-139 | ATCTCATGCTTATAT | 11.2 |
GltC | gltA | Bsu | -114..-128 | ATCTCATTTTGAGAT | 19.8 |
GltC | gltA | Lla | -82..-96 | ATTACATTTATATAT | 9.7 |
GltC | gltA | Lin | -165..-179 | ATCTCATTTCGAGAA | 14.7 |
GltC | gltA | Ype | -125..-139 | ATCTCATGCTTATAT | 11.2 |
GltC | gltC | Bsu | -21..-35 | ATCTCATTTTGAGAT | 19.8 |
GltC | gltC | Bha | -17..-31 | ATCTATGTTTGATAT | 11.7 |
GltC | gltC | Cac | -31..-45 | ATATAAATTTTATAT | 11 |
GltC | gltC | Spy | -113..-127 | ATTCAATTTTGAGAG | 9.2 |
GltC | gltC | Sau | -202..-216 | ATTTCTATTAGCGAT | 9.1 |
GltC | gltC | Lin | -6..-20 | TGCTCCTTTTGATAT | 9.9 |
GltC | gltC | Eco | -40..-54 | ATTTCATTTTGATAC | 12 |
GltC | gltC | EcZ | -40..-54 | ATTTCATTTTGATAC | 12 |
GltC | gltC | Ecs | -40..-54 | ATTTCATTTTGATAC | 12 |
GltC | gltC | Ype | -7..-21 | TTCTCTTTTTGTGAT | 11.4 |
GltC | gltC | Sty | -34..-48 | ATCTCTTTGAAAGAT | 10.4 |
GltC | gltC | Pae | -8..-22 | ATCTCTTTATGAGAA | 11.4 |
GltC | gltC | Hin | -13..-27 | TTCTTAATTTTATAT | 10.2 |
GltC | gltC | Pmu | -48..-62 | ATCTATTTTTCAGAT | 12.5 |
GltC | gltC | Nme | -127..-141 | ATCTTTTTTTTTGAT | 9.7 |
GltC | gltC | NmA | -127..-141 | ATCTTTTTTTTTGAT | 9.7 |
GltC | gltC | Rso | -27..-41 | ATCAAATTTTTGGAT | 11.2 |
GltC | gltC | Atu | -3..-17 | ATCATGATTTGAGAT | 10.4 |
GltC | gltC | Sme | -63..-77 | ATCTCCTTCTGAGAC | 11.4 |
GltC | gltC | Bme | -106..-120 | GCCTCCATTTGAGAT | 10.6 |
GltC | gltC | Mlo | -25..-39 | ATCTCGTTTCGAGAT | 14.7 |
GltC | gltC | Syn | -25..-39 | ATGTAATTTATAGAA | 9.7 |
GltC | gltC | Nos | -153..-167 | ATCTCCTTCTGATAG | 9.9 |
position : counted from translation start site.