We scaned GltR binding sites at upstream reagion of the ortholog genes by PSSM.
Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
---|
GltR | gltA | Bsu | -114..-128 | ATCTCATTTTGAGAT | 17.2 |
GltR | gltA | Lin | -165..-179 | ATCTCATTTCGAGAA | 11.8 |
GltR | gltA | Ype | -125..-139 | ATCTCATGCTTATAT | 9.5 |
GltR | gltA | Bsu | -114..-128 | ATCTCATTTTGAGAT | 17.2 |
GltR | gltA | Lin | -165..-179 | ATCTCATTTCGAGAA | 11.8 |
GltR | gltA | Ype | -125..-139 | ATCTCATGCTTATAT | 9.5 |
GltR | gltA | Bsu | -114..-128 | ATCTCATTTTGAGAT | 17.2 |
GltR | gltA | Lin | -165..-179 | ATCTCATTTCGAGAA | 11.8 |
GltR | gltA | Ype | -125..-139 | ATCTCATGCTTATAT | 9.5 |
GltR | gltR | Bsu | -21..-35 | ATCTGATTTTGAGAT | 17.2 |
GltR | gltR | Bha | -17..-31 | ATCTATGTTTGATAT | 10.4 |
GltR | gltR | Cac | -31..-45 | ATATAAATTTTATAT | 11.2 |
GltR | gltR | Mle | -76..-90 | ATCTGATTTTGAATC | 10.1 |
GltR | gltR | Eco | -98..-112 | ATCTTATTTTAAAAT | 12.7 |
GltR | gltR | EcZ | -98..-112 | ATCTTATTTTAAAAT | 12.7 |
GltR | gltR | Ecs | -98..-112 | ATCTTATTTTAAAAT | 12.7 |
GltR | gltR | Ype | -82..-96 | ATCTGAATTTTATTT | 12.4 |
GltR | gltR | Pae | -7..-21 | ATCTTTATTGGAGAT | 11.3 |
GltR | gltR | Hin | -13..-27 | TTCTTAATTTTATAT | 11.9 |
GltR | gltR | Pmu | -48..-62 | ATCTATTTTTCAGAT | 11.1 |
GltR | gltR | Nme | -127..-141 | ATCTTTTTTTTTGAT | 10.7 |
GltR | gltR | NmA | -127..-141 | ATCTTTTTTTTTGAT | 10.7 |
GltR | gltR | Rso | -27..-41 | ATCAAATTTTTGGAT | 12.6 |
GltR | gltR | Atu | -3..-17 | ATCATGATTTGAGAT | 10.9 |
GltR | gltR | Mlo | -25..-39 | ATCTCGTTTCGAGAT | 11.8 |
position : counted from translation start site.