We scaned PerR binding sites at upstream reagion of the ortholog genes by PSSM.
| Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
|---|
| PerR | ahpC | Bsu | -47..-61 | TTAGAATTATTATTG | 13.9 |
|---|
| PerR | ahpC | Bha | -102..-116 | TTATAATTGATATTA | 10.2 |
|---|
| PerR | ahpC | Spy | -141..-155 | TTAAAATGATTCTAA | 11.9 |
|---|
| PerR | ahpC | Lin | -87..-101 | TTATAATTACTATAA | 15 |
|---|
| PerR | ahpC | Pae | -198..-212 | TGAGAATGATTGTCA | 10.8 |
|---|
| PerR | ahpC | Ccr | -62..-76 | ATAGAAGTTTTATCA | 8.2 |
|---|
| PerR | ahpC | Rpr | -54..-68 | TTATTATTGTAATAA | 8.8 |
|---|
| PerR | ahpC | Rco | -42..-56 | TTGTAATAATAATTA | 9.5 |
|---|
| PerR | ahpC | Tma | -25..-39 | TTAAAATGATTCTAA | 11.9 |
|---|
| PerR | ahpC | Fnu | -58..-72 | TTGTAATGATTACAA | 14 |
|---|
| PerR | fur | Bha | -41..-55 | TTATAAAGATTATAA | 14.8 |
|---|
| PerR | fur | Cac | -54..-68 | CGATAATTTTTATTA | 11.6 |
|---|
| PerR | fur | Lla | -77..-91 | TTAGAATGATTCTAA | 14 |
|---|
| PerR | fur | Lin | -16..-30 | AAATAATTATTATAT | 9 |
|---|
| PerR | fur | EcZ | -85..-99 | TATTAATTATTATCG | 9.1 |
|---|
| PerR | fur | Ecs | -85..-99 | TATTAATTATTATCG | 9.1 |
|---|
| PerR | fur | Hpy | -86..-100 | TCATTATTATTTTAA | 8.6 |
|---|
| PerR | fur | jHp | -86..-100 | TCATTATTATTTTAA | 8.6 |
|---|
| PerR | fur | Syn | -25..-39 | TGATAATGATTATCG | 13.2 |
|---|
| PerR | fur | Nos | -79..-93 | TGAGAATATTTATTA | 9.7 |
|---|
| PerR | hemA | Bsu | -66..-80 | TTATAATTATTATAA | 18.3 |
|---|
| PerR | hemA | Bha | -236..-250 | TTAGAATTATTATTA | 15.6 |
|---|
| PerR | hemA | Cac | -59..-73 | GTATAATTATACTAA | 8.6 |
|---|
| PerR | katA | Bsu | -65..-79 | TTATAATTATTATAA | 18.3 |
|---|
| PerR | katA | Bha | -55..-69 | TGGAAATTTTTATGA | 8.6 |
|---|
| PerR | katA | Ype | -77..-91 | TTAAAATTATTATCT | 10.8 |
|---|
| PerR | katA | Hin | -12..-26 | TTGTAAAGTTAATAA | 9.3 |
|---|
| PerR | katA | Nme | -193..-207 | TTAATATTATTATAA | 12.1 |
|---|
| PerR | katA | NmA | -193..-207 | TTAATATTATTATAA | 12.1 |
|---|
| PerR | katA | Hpy | -218..-232 | TAATAATTATTATTA | 13.3 |
|---|
| PerR | katA | jHp | -219..-233 | TGATAATTATTATTA | 14.7 |
|---|
| PerR | mrgA | Bsu | -70..-84 | TTATAATTATTATAA | 18.3 |
|---|
| PerR | mrgA | Spy | -144..-158 | TTAGAATCATTATCG | 11.5 |
|---|
| PerR | mrgA | Mpu | -18..-32 | AGAAAATTATTATAA | 10.6 |
|---|
| PerR | mrgA | Ype | -168..-182 | TTATAAATAATATAG | 10 |
|---|
| PerR | mrgA | Hin | -241..-255 | TTATAATTTTTAATA | 11.7 |
|---|
| PerR | mrgA | Cje | -51..-65 | TAATAATTATTATTA | 13.3 |
|---|
| PerR | mrgA | Nos | -17..-31 | GAGTAATTATTATTA | 9.4 |
|---|
| PerR | mrgA | Fnu | -134..-148 | TTATAATTATTACAA | 15 |
|---|
| PerR | perR | Bha | -41..-55 | TTATAAAGATTATAA | 14.8 |
|---|
| PerR | perR | Cac | -54..-68 | CGATAATTTTTATTA | 11.6 |
|---|
| PerR | perR | Lla | -77..-91 | TTAGAATGATTCTAA | 14 |
|---|
| PerR | perR | Lin | -16..-30 | AAATAATTATTATAT | 9 |
|---|
| PerR | perR | EcZ | -85..-99 | TATTAATTATTATCG | 9.1 |
|---|
| PerR | perR | Ecs | -85..-99 | TATTAATTATTATCG | 9.1 |
|---|
| PerR | perR | Hpy | -86..-100 | TCATTATTATTTTAA | 8.6 |
|---|
| PerR | perR | jHp | -86..-100 | TCATTATTATTTTAA | 8.6 |
|---|
| PerR | perR | Syn | -25..-39 | TGATAATGATTATCG | 13.2 |
|---|
| PerR | perR | Nos | -79..-93 | TGAGAATATTTATTA | 9.7 |
|---|
| PerR | ykvW | Bsu | -166..-180 | TGATAATTATTATCA | 15.1 |
|---|
| PerR | ykvW | Bha | -176..-190 | TTAAAATTATTATTG | 11.8 |
|---|
| PerR | ykvW | Lla | -90..-104 | TTGTAATATTTATAG | 11.6 |
|---|
| PerR | ykvW | Spy | -51..-65 | TTAGAATTATTATAA | 17.5 |
|---|
| PerR | ykvW | Lin | -89..-103 | CAATAATTATTATAA | 13.5 |
|---|
| PerR | ykvW | Pmu | -32..-46 | TTATTATTCTTATTG | 8.5 |
|---|
| PerR | ykvW | Cje | -17..-31 | TTATAATTATAAAAA | 11.7 |
|---|
| PerR | ykvW | Bbu | -66..-80 | TTATATATGTTATAA | 8.8 |
|---|
| PerR | ykvW | Syn | -12..-26 | TTGTACTGAGTATTA | 8.8 |
|---|
| PerR | ykvW | Tma | -27..-41 | CTACAATTAGTATAG | 8.7 |
|---|
| PerR | ykvW | Fnu | -53..-67 | CTATAATTTTGAAAA | 8.6 |
|---|
position : counted from translation start site.