We scaned ResD binding sites at upstream reagion of the ortholog genes by PSSM.
| Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
|---|
| ResD | ctaA | Bsu | -95..-105 | ATTTTTGTGAA | 12.2 |
|---|
| ResD | ctaA | Syn | -208..-218 | ATTCTTGTGGC | 9.3 |
|---|
| ResD | ctaB | Bsu | -252..-262 | ATTTTTGTGAA | 12.2 |
|---|
| ResD | fnr | Bsu | -79..-89 | AATCTTGTGAA | 12.7 |
|---|
| ResD | fnr | Lin | -52..-62 | AATTTTGTTAA | 11.5 |
|---|
| ResD | fnr | Hin | -93..-103 | AATTTTGTTAA | 11.5 |
|---|
| ResD | fnr | Mlo | -13..-23 | AATTTTGGGAA | 10.4 |
|---|
| ResD | fnr | Cpn | -84..-94 | TATTTTGGGAA | 9.3 |
|---|
| ResD | fnr | Syn | -78..-88 | AATTTAGTGAA | 10.4 |
|---|
| ResD | fnr | Nos | -253..-263 | TATTTTCTGAC | 9.2 |
|---|
| ResD | fnr | Dra | -92..-102 | AATTTTGTAAA | 10.1 |
|---|
| ResD | hmp | Bsu | -103..-113 | AATTTTGTGAC | 13.9 |
|---|
| ResD | hmp | Eco | -30..-40 | AATTTTGTTAC | 12.1 |
|---|
| ResD | hmp | EcZ | -30..-40 | ACTTTTGTTAC | 9.6 |
|---|
| ResD | hmp | Ecs | -30..-40 | ACTTTTGTTAC | 9.6 |
|---|
| ResD | hmp | Pae | -26..-36 | AGTTTTGTGAA | 10.8 |
|---|
| ResD | hmp | Rso | -174..-184 | TTTATTGTGAC | 9.2 |
|---|
| ResD | hmp | Bsu | -103..-113 | AATTTTGTGAC | 13.9 |
|---|
| ResD | hmp | Eco | -30..-40 | AATTTTGTTAC | 12.1 |
|---|
| ResD | hmp | EcZ | -30..-40 | ACTTTTGTTAC | 9.6 |
|---|
| ResD | hmp | Ecs | -30..-40 | ACTTTTGTTAC | 9.6 |
|---|
| ResD | hmp | Pae | -26..-36 | AGTTTTGTGAA | 10.8 |
|---|
| ResD | hmp | Rso | -174..-184 | TTTATTGTGAC | 9.2 |
|---|
| ResD | lctE | Bsu | -79..-89 | AAGTTTGTGAA | 10.4 |
|---|
| ResD | lctE | Bha | -198..-208 | CATTTTGTGAA | 10.8 |
|---|
| ResD | lctE | Spn | -155..-165 | AATGTTGTTAC | 9.6 |
|---|
| ResD | lctE | Lin | -111..-121 | TATTTTGTAAA | 9 |
|---|
| ResD | lctE | Eco | -61..-71 | AATTTTGTGGA | 10.4 |
|---|
| ResD | lctE | EcZ | -61..-71 | AATTTTGTGGA | 10.4 |
|---|
| ResD | lctE | Ecs | -61..-71 | AATTTTGTGGA | 10.4 |
|---|
| ResD | lctE | Pmu | -104..-114 | TTTTTTGTGAA | 11.1 |
|---|
| ResD | lctE | NmA | -118..-128 | ATTTTTGTTAA | 10.4 |
|---|
| ResD | nasD | Bsu | -81..-91 | TATTTTGTTAC | 11 |
|---|
| ResD | phoP | Cac | -270..-280 | ATTTTTGTGTA | 9.3 |
|---|
| ResD | phoP | Lla | -164..-174 | AATTTTGTTAT | 9.4 |
|---|
| ResD | phoP | Spn | -60..-70 | AATTTTGTAAC | 10.7 |
|---|
| ResD | phoP | Sau | -98..-108 | ATTTTTGTGTA | 9.3 |
|---|
| ResD | phoP | Cgl | -89..-99 | ATTTGTGTGAA | 9.3 |
|---|
| ResD | phoP | Mle | -186..-196 | TATTTTGTGTA | 9.3 |
|---|
| ResD | phoP | Eco | -107..-117 | TATCTTGTTAA | 9.8 |
|---|
| ResD | phoP | EcZ | -107..-117 | TATCTTGTTAA | 9.8 |
|---|
| ResD | phoP | Ecs | -107..-117 | TATCTTGTTAA | 9.8 |
|---|
| ResD | phoP | Ype | -59..-69 | AGTTTTGTGAC | 11.4 |
|---|
| ResD | phoP | Vch | -145..-155 | AATCTTGTTAA | 10.9 |
|---|
| ResD | phoP | Pmu | -40..-50 | ATTTTTGTGTA | 9.3 |
|---|
| ResD | phoP | Xfa | -77..-87 | TTTTTTGTTAA | 9.3 |
|---|
| ResD | phoP | Cje | -46..-56 | AATTTTGATAC | 9.2 |
|---|
| ResD | phoP | Mlo | -233..-243 | AATTTTGTTTC | 9.2 |
|---|
| ResD | phoP | Nos | -180..-190 | AATTTTGTGTA | 10.4 |
|---|
| ResD | qcrA | Spn | -49..-59 | TATCTTGTGAA | 11.6 |
|---|
| ResD | qcrA | Nme | -18..-28 | TATTTTGGGAA | 9.3 |
|---|
| ResD | qcrA | NmA | -18..-28 | TATTTTGGGAA | 9.3 |
|---|
| ResD | qcrA | Hpy | -95..-105 | AATTTTGTTAT | 9.4 |
|---|
| ResD | qcrA | jHp | -95..-105 | AATTTTGTTAT | 9.4 |
|---|
| ResD | qcrA | Nos | -21..-31 | TATTTTGTTAA | 10.4 |
|---|
| ResD | resA | Cac | -27..-37 | ATTTTAGTGAC | 9.9 |
|---|
| ResD | resA | Mle | -130..-140 | AAATTTGTGAA | 10.4 |
|---|
| ResD | resA | Sty | -68..-78 | AATTTTGAGAC | 11 |
|---|
| ResD | resA | Vch | -87..-97 | TATTTGGTGAC | 9.9 |
|---|
| ResD | resA | Hin | -13..-23 | TATTTTGTGAA | 12.2 |
|---|
| ResD | resA | Pmu | -12..-22 | TTTTTTGTTAA | 9.3 |
|---|
| ResD | resA | NmA | -26..-36 | AATGTTGTGAA | 10.8 |
|---|
| ResD | resA | Tpa | -172..-182 | TGTCTTGTGAC | 9.7 |
|---|
| ResD | resA | Nos | -72..-82 | TTTTTTGTGAC | 11.7 |
|---|
| ResD | resA | Fnu | -88..-98 | ATTTATGTGAC | 9.9 |
|---|
position : counted from translation start site.