match_sequences

SigD

We scaned SigD binding sites at upstream reagion of the ortholog genes by PSSM.

Transcription Factor	Regulatec gene	organism	position	cis-element	socre
SigD	cheV	Bsu	-39..-66	`TCACTTTTTACAAATTACGCCGATATAT`	`15.7`
SigD	cheV	Bha	-35..-62	`TCAAAATGACGGAAAAAGGACGATAAAA`	`13`
SigD	cheV	Cac	-259..-284	`TAATTTACATAAAATCTACGATATAT`	`10.9`
SigD	cheV	Lin	-78..-105	`TAAAGTGTTTTTTGTAACTGCAATATAA`	`9.1`
SigD	cheV	Mtu	-77..-104	`TCACTCTGGCCTTGTTGTGCCCATATGT`	`10.7`
SigD	cheV	Eco	-186..-213	`TGAAATCCACTAGTCTTGTCCGGTATAT`	`9.1`
SigD	cheV	Ype	-137..-164	`TAAAGAATGGAGCCATATGCCAATAAAT`	`13.2`
SigD	cheV	Sty	-54..-79	`TCAAATTGTGATTGAAGCCGACATTT`	`11.3`
SigD	cheV	Vch	-50..-79	`TAAATTCAAGCCATTCCGTTGCCGATACGG`	`13.8`
SigD	cheV	Pae	-9..-36	`AGAAGAATGATTCACCGAGTCGATATAG`	`10.6`
SigD	cheV	Xfa	-197..-223	`TGATTTGAAACAGAGATGCCGATGTTA`	`10.1`
SigD	cheV	Rso	-47..-75	`TCAAGAAATGTTGCGGGCGGCCGATGTCA`	`9.8`
SigD	cheV	Hpy	-218..-244	`TAAAATAACTCTTTGAGTGCGATAAAG`	`10`
SigD	cheV	Atu	-80..-111	`TGAATCGGTATAGCGCTGTTTGGGCGATAGTA`	`9.6`
SigD	cheV	Bme	-194..-223	`TAAAAACAATATGCTTCCATGCCGAGAGGG`	`10.1`
SigD	cheV	Mlo	-12..-40	`TAAATGAAGCGTAATCCCGGTCGTTAAAA`	`11`
SigD	cheV	Ccr	-74..-105	`TCAATCATTCGTTAGCTATGCCGCCGATATCA`	`14.2`
SigD	cheV	Bbu	-55..-81	`AAAATATCAATCAAAAAGACAATATTA`	`9`
SigD	cheV	Syn	-137..-165	`TAACCGGAAAGAAAGCATGGGGGATATAA`	`10.2`
SigD	cheV	Nos	-214..-240	`TAGAGTCCATGAGTTTAGCCGAAATAA`	`13.1`
SigD	cheV	Bsu	-39..-66	`TCACTTTTTACAAATTACGCCGATATAT`	`15.7`
SigD	cheV	Bha	-35..-62	`TCAAAATGACGGAAAAAGGACGATAAAA`	`13`
SigD	cheV	Cac	-259..-284	`TAATTTACATAAAATCTACGATATAT`	`10.9`
SigD	cheV	Lin	-78..-105	`TAAAGTGTTTTTTGTAACTGCAATATAA`	`9.1`
SigD	cheV	Eco	-186..-213	`TGAAATCCACTAGTCTTGTCCGGTATAT`	`9.1`
SigD	cheV	Ype	-137..-164	`TAAAGAATGGAGCCATATGCCAATAAAT`	`13.2`
SigD	cheV	Sty	-54..-79	`TCAAATTGTGATTGAAGCCGACATTT`	`11.3`
SigD	cheV	Vch	-50..-79	`TAAATTCAAGCCATTCCGTTGCCGATACGG`	`13.8`
SigD	cheV	Pae	-9..-36	`AGAAGAATGATTCACCGAGTCGATATAG`	`10.6`
SigD	cheV	Xfa	-197..-223	`TGATTTGAAACAGAGATGCCGATGTTA`	`10.1`
SigD	cheV	Rso	-47..-75	`TCAAGAAATGTTGCGGGCGGCCGATGTCA`	`9.8`
SigD	cheV	Hpy	-218..-244	`TAAAATAACTCTTTGAGTGCGATAAAG`	`10`
SigD	cheV	Atu	-80..-111	`TGAATCGGTATAGCGCTGTTTGGGCGATAGTA`	`9.6`
SigD	cheV	Mlo	-12..-40	`TAAATGAAGCGTAATCCCGGTCGTTAAAA`	`11`
SigD	cheV	Ccr	-74..-105	`TCAATCATTCGTTAGCTATGCCGCCGATATCA`	`14.2`
SigD	cheV	Bbu	-55..-81	`AAAATATCAATCAAAAAGACAATATTA`	`9`
SigD	cheV	Syn	-137..-165	`TAACCGGAAAGAAAGCATGGGGGATATAA`	`10.2`
SigD	cheV	Nos	-214..-240	`TAGAGTCCATGAGTTTAGCCGAAATAA`	`13.1`
SigD	dltA	Bsu	-266..-293	`TCATTTTCAAAAACATACGCCGATATAT`	`15.9`
SigD	dltA	Lla	-103..-132	`TAAAGTAAAATACTGTTTTAGCCAAAAATA`	`9.7`
SigD	dltA	Spy	-92..-118	`TAAAATAAAATTGTCTTGCCAATAAAA`	`14.2`
SigD	dltA	MtC	-64..-95	`GAAAGCATCGCATGCTGCAAGGTCCGATACAA`	`9.9`
SigD	dltA	Ype	-24..-52	`TCAATATTGGGCCGTTGGTGGAGATATAA`	`9.8`
SigD	dltA	Pae	-201..-232	`TCATCGCTTTTCTCTCTTTCCTGACGATAAGA`	`10.8`
SigD	dltA	Cje	-29..-60	`TAAAGGCCTTTTTTATTAATTTATCGATATTA`	`11.7`
SigD	dltA	Atu	-18..-47	`TATACATGATTTGGAATTGCGCCGAAAGGA`	`9.9`
SigD	dltA	Mlo	-219..-247	`AAATTGCAGCGGCGGCACAGCCGAAAATG`	`9.4`
SigD	dltA	Nos	-63..-91	`TAATTAAACGCATATAAACACCGATAAAC`	`11.5`
SigD	epr	Bsu	-34..-60	`TAATCTCTCTTTTTTTCTCCGATATAT`	`14.6`
SigD	epr	Bha	-73..-101	`TAAAATACGACAAAATTCGACCGATATAA`	`16.5`
SigD	epr	Cac	-70..-99	`TAACAATAAGGCAATCATTTGCATATATAA`	`9.3`
SigD	epr	Mtu	-186..-217	`CAACGGTTTTGCTACCGCACTAGCCGATATGC`	`10.3`
SigD	epr	Xfa	-24..-50	`AAAAGTGTTTTTGTGATGTCGATTAAA`	`9.5`
SigD	epr	Nme	-202..-227	`AGAAAAAGCCGTCTAAGCCGGTATAA`	`11.3`
SigD	epr	NmA	-202..-227	`AGAAAAAGCCGTCTAAGCCGGTATAA`	`11.3`
SigD	epr	Rso	-46..-77	`TCACGCGCGCGTCACCGACGCTGCCGATACTC`	`9.9`
SigD	epr	Atu	-79..-104	`AAAAACTGAAATAAGCGCCGTTTAAA`	`9.3`
SigD	epr	Fnu	-115..-140	`TAAAAAACCAGGAATAGAAGATAAAA`	`9.9`
SigD	epr	Dra	-143..-174	`AAATCTTACATGAAGATGCCGTCCCGATATAC`	`11.3`
SigD	flgB	Bsu	-232..-259	`TCAAAAAGTTTCAAAAATGCCGAAAAGA`	`12.5`
SigD	flgB	Bha	-252..-279	`ACAAACTTCCTACTGTTTTCGGATATAT`	`9`
SigD	flgB	Cac	-16..-42	`TAATAAAGGGTATAAAAGTCTATAAAA`	`9.2`
SigD	flgB	Spy	-109..-135	`AAAATTTCAAAATTTTTGCCGATTTTA`	`12.8`
SigD	flgB	Pae	-192..-217	`AAAAAGGCCCGATATCGTCGATATCG`	`9.1`
SigD	fliH	Eco	-115..-140	`AAAAACGGGTTTATTGGCGGATAGAA`	`11.7`
SigD	fliH	EcZ	-115..-140	`AAAAACGGGTTTATTGGCGGATAGAA`	`11.7`
SigD	fliH	Ecs	-115..-140	`AAAAACGGGTTTATTGGCGGATAGAA`	`11.7`
SigD	fliK	Bsu	-114..-141	`AGACCGACGACGGGTTCTGCCGCTAAAA`	`9.8`
SigD	fliK	Eco	-115..-140	`AAAAACGGGTTTATTGGCGGATAGAA`	`11.7`
SigD	fliK	EcZ	-115..-140	`AAAAACGGGTTTATTGGCGGATAGAA`	`11.7`
SigD	fliL	Bsu	-41..-68	`AAAAGATCGCAGCTTTCTACCGAAAAAT`	`9.7`
SigD	fliL	Lla	-82..-113	`AAAAAGTTTATCGAATTTTTCCTTCGATAAGA`	`9.5`
SigD	fliL	Spy	-40..-67	`TAAATGATTAGAAAATGCGATGATATAT`	`9.5`
SigD	fliL	Eco	-29..-57	`TCAAGACGCAGGATAATTAGCCGATAAGC`	`13`
SigD	fliL	EcZ	-30..-58	`TCAAGACGCAGGATAATTAGCCGATAAGC`	`13`
SigD	fliL	Ecs	-29..-57	`TCAAGACGCAGGATAATTAGCCGATAAGC`	`13`
SigD	fliL	Aae	-18..-45	`TAATACGATACTTGAGGACACGATAAAT`	`9.3`
SigD	hag	Bsu	-98..-125	`TAACAAAATCAGAGACAATCCGATATTA`	`14`
SigD	hag	Bha	-112..-140	`TAAACTCCTGTGAAATCGTGTCGATATTA`	`14.5`
SigD	hag	Cac	-79..-107	`TAAAGTGATAAAGAAATGCTCCGATATAT`	`15.7`
SigD	hag	Eco	-33..-61	`TCAAGTCCGGCGGGTCGCTGCCGATAATA`	`15.3`
SigD	hag	EcZ	-33..-61	`TCAAGTCCGGCGGGTCGCTGCCGATAATA`	`15.3`
SigD	hag	Ecs	-33..-61	`TCAAGTCCGGCGGGTCGCTGCCGATAATA`	`15.3`
SigD	hag	Ype	-56..-84	`TAATGATTCACACAACCGTGCCGTTTTAT`	`9.9`
SigD	hag	Pae	-94..-122	`TAAAGCTCCGCCGGGAAACGCCGATAAAC`	`15.4`
SigD	hag	Hpy	-57..-83	`TAAAATTTCAAACTTTAACCGATTATA`	`10.1`
SigD	hag	jHp	-57..-83	`TAAAATTTCAAACTTTAACCGATAATA`	`13.8`
SigD	hag	Bme	-107..-138	`TTAATATTTATACCTTAGGAATGGCGATATGG`	`10`
SigD	hag	Ccr	-161..-192	`TAACCCGCATTTAATGAAGCGCGCCGATCTGG`	`10.9`
SigD	hag	Tpa	-93..-121	`TCAAGTCCTTTTCCGTTTTTCCGAAAATA`	`9.6`
SigD	hag	Aae	-37..-65	`TAAAACTTTTTTCTTTTCCTCCGATAAAT`	`14.4`
SigD	hag	Tma	-65..-93	`TAAAATCCCTAAAGCCTCTTCCGATTAAA`	`11.7`
SigD	lytD	Bsu	-45..-72	`TAAATGAAGCATGCGCGTGCCGATAAAT`	`17`
SigD	lytD	Sty	-25..-53	`ACAAAGCGCTATGCTTAACGCTGATATTT`	`9.1`
SigD	mcpB	Bsu	-31..-57	`TAAAACTTTTTTAAGCAGCCGATATAT`	`18.3`
SigD	mcpB	Bha	-34..-61	`TAAAAAATTTCCTCATGAACCGATAATA`	`13.8`
SigD	mcpB	Cac	-3..-34	`TAAATTCCTCCTTTGATTTTATACCAATATAA`	`12.7`
SigD	mcpB	Lin	-116..-144	`ACAATATCACCCATTTTACGCCGATATTC`	`12.6`
SigD	mcpB	Eco	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpB	EcZ	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpB	Ecs	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpB	Ype	-192..-220	`TAAAGTTTCATCAACTCCTGCCGATAGAG`	`15.5`
SigD	mcpB	Sty	-81..-107	`TAAATGATTAAAGAAATGCCGATGTGA`	`13.8`
SigD	mcpB	Vch	-40..-68	`TTATTTAAAATAAATGCCCTCCGATAATA`	`10.1`
SigD	mcpB	Pae	-45..-73	`TAAACCTGGTGCCCCGCCTGCCGATAGAA`	`17.1`
SigD	mcpB	Rso	-60..-89	`TCAAGGTCTGCGCGCAAGTTGCCGATAGAC`	`13.2`
SigD	mcpB	Hpy	-55..-81	`TAAATGCACCCCCCCCCCCCGAAAAAT`	`11`
SigD	mcpB	jHp	-58..-85	`TAAATGCACCCCCCCCCCCCCGAAAAAT`	`11`
SigD	mcpB	Cje	-156..-182	`TAAATTTTTTAAATTATAACGATATTA`	`11.4`
SigD	mcpB	Atu	-153..-184	`TTAACTGCCGACATGCTTTGCCGCCGAAATAT`	`12.4`
SigD	mcpB	Ccr	-124..-152	`TAAACCATCCCCTCGTTCCCACGATATTG`	`9.7`
SigD	mcpB	Rco	-7..-34	`AAATAGAGATACGACACAACCTATATAA`	`9.7`
SigD	mcpB	Nos	-150..-177	`AGACGAAAAAATTGCGAGTCCGATAAAA`	`10.4`
SigD	mcpB	Tma	-84..-109	`TAATAACGATGATGTTACGGATATTA`	`10`
SigD	mcpC	Bsu	-31..-57	`TAAAACTTTTTTAAGCAGCCGATATAT`	`18.3`
SigD	mcpC	Bha	-34..-61	`TAAAAAATTTCCTCATGAACCGATAATA`	`13.8`
SigD	mcpC	Cac	-3..-34	`TAAATTCCTCCTTTGATTTTATACCAATATAA`	`12.7`
SigD	mcpC	Lin	-116..-144	`ACAATATCACCCATTTTACGCCGATATTC`	`12.6`
SigD	mcpC	Eco	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpC	EcZ	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpC	Ecs	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpC	Ype	-192..-220	`TAAAGTTTCATCAACTCCTGCCGATAGAG`	`15.5`
SigD	mcpC	Sty	-81..-107	`TAAATGATTAAAGAAATGCCGATGTGA`	`13.8`
SigD	mcpC	Vch	-40..-68	`TTATTTAAAATAAATGCCCTCCGATAATA`	`10.1`
SigD	mcpC	Pae	-45..-73	`TAAACCTGGTGCCCCGCCTGCCGATAGAA`	`17.1`
SigD	mcpC	Rso	-60..-89	`TCAAGGTCTGCGCGCAAGTTGCCGATAGAC`	`13.2`
SigD	mcpC	Hpy	-55..-81	`TAAATGCACCCCCCCCCCCCGAAAAAT`	`11`
SigD	mcpC	jHp	-58..-85	`TAAATGCACCCCCCCCCCCCCGAAAAAT`	`11`
SigD	mcpC	Cje	-156..-182	`TAAATTTTTTAAATTATAACGATATTA`	`11.4`
SigD	mcpC	Atu	-153..-184	`TTAACTGCCGACATGCTTTGCCGCCGAAATAT`	`12.4`
SigD	mcpC	Ccr	-124..-152	`TAAACCATCCCCTCGTTCCCACGATATTG`	`9.7`
SigD	mcpC	Rco	-7..-34	`AAATAGAGATACGACACAACCTATATAA`	`9.7`
SigD	mcpC	Nos	-150..-177	`AGACGAAAAAATTGCGAGTCCGATAAAA`	`10.4`
SigD	mcpC	Tma	-84..-109	`TAATAACGATGATGTTACGGATATTA`	`10`
SigD	motA	Bsu	-41..-69	`TAAAGTTCCGGGCACCAAAACCGATATTA`	`15.1`
SigD	motA	Cac	-86..-112	`TAGTTTTGTTGAAATATGTCGATAAAA`	`10.4`
SigD	motA	Lin	-78..-105	`TAAAGTGTTTTTTGTAACTGCAATATAA`	`9.1`
SigD	motA	Ccr	-19..-50	`TAATCATTAATCGGCATGATGCGCCGATAAAT`	`15.9`
SigD	motA	Aae	-12..-39	`TAAATTTTAAAAAGGAAATCCGATAAAT`	`14.4`
SigD	tlpA	Bsu	-31..-57	`TAAAACTTTTTTAAGCAGCCGATATAT`	`18.3`
SigD	tlpA	Bha	-34..-61	`TAAAAAATTTCCTCATGAACCGATAATA`	`13.8`
SigD	tlpA	Cac	-3..-34	`TAAATTCCTCCTTTGATTTTATACCAATATAA`	`12.7`
SigD	tlpA	Lin	-116..-144	`ACAATATCACCCATTTTACGCCGATATTC`	`12.6`
SigD	tlpA	Eco	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpA	EcZ	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpA	Ecs	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpA	Ype	-192..-220	`TAAAGTTTCATCAACTCCTGCCGATAGAG`	`15.5`
SigD	tlpA	Sty	-81..-107	`TAAATGATTAAAGAAATGCCGATGTGA`	`13.8`
SigD	tlpA	Vch	-40..-68	`TTATTTAAAATAAATGCCCTCCGATAATA`	`10.1`
SigD	tlpA	Pae	-45..-73	`TAAACCTGGTGCCCCGCCTGCCGATAGAA`	`17.1`
SigD	tlpA	Rso	-60..-89	`TCAAGGTCTGCGCGCAAGTTGCCGATAGAC`	`13.2`
SigD	tlpA	Hpy	-55..-81	`TAAATGCACCCCCCCCCCCCGAAAAAT`	`11`
SigD	tlpA	jHp	-58..-85	`TAAATGCACCCCCCCCCCCCCGAAAAAT`	`11`
SigD	tlpA	Cje	-156..-182	`TAAATTTTTTAAATTATAACGATATTA`	`11.4`
SigD	tlpA	Atu	-153..-184	`TTAACTGCCGACATGCTTTGCCGCCGAAATAT`	`12.4`
SigD	tlpA	Ccr	-124..-152	`TAAACCATCCCCTCGTTCCCACGATATTG`	`9.7`
SigD	tlpA	Rco	-7..-34	`AAATAGAGATACGACACAACCTATATAA`	`9.7`
SigD	tlpA	Nos	-150..-177	`AGACGAAAAAATTGCGAGTCCGATAAAA`	`10.4`
SigD	tlpA	Tma	-84..-109	`TAATAACGATGATGTTACGGATATTA`	`10`
SigD	tlpB	Bsu	-31..-57	`TAAAACTTTTTTAAGCAGCCGATATAT`	`18.3`
SigD	tlpB	Bha	-34..-61	`TAAAAAATTTCCTCATGAACCGATAATA`	`13.8`
SigD	tlpB	Cac	-3..-34	`TAAATTCCTCCTTTGATTTTATACCAATATAA`	`12.7`
SigD	tlpB	Lin	-116..-144	`ACAATATCACCCATTTTACGCCGATATTC`	`12.6`
SigD	tlpB	Eco	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpB	EcZ	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpB	Ecs	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpB	Ype	-192..-220	`TAAAGTTTCATCAACTCCTGCCGATAGAG`	`15.5`
SigD	tlpB	Sty	-81..-107	`TAAATGATTAAAGAAATGCCGATGTGA`	`13.8`
SigD	tlpB	Vch	-40..-68	`TTATTTAAAATAAATGCCCTCCGATAATA`	`10.1`
SigD	tlpB	Pae	-45..-73	`TAAACCTGGTGCCCCGCCTGCCGATAGAA`	`17.1`
SigD	tlpB	Rso	-60..-89	`TCAAGGTCTGCGCGCAAGTTGCCGATAGAC`	`13.2`
SigD	tlpB	Hpy	-55..-81	`TAAATGCACCCCCCCCCCCCGAAAAAT`	`11`
SigD	tlpB	jHp	-58..-85	`TAAATGCACCCCCCCCCCCCCGAAAAAT`	`11`
SigD	tlpB	Cje	-156..-182	`TAAATTTTTTAAATTATAACGATATTA`	`11.4`
SigD	tlpB	Atu	-153..-184	`TTAACTGCCGACATGCTTTGCCGCCGAAATAT`	`12.4`
SigD	tlpB	Ccr	-124..-152	`TAAACCATCCCCTCGTTCCCACGATATTG`	`9.7`
SigD	tlpB	Rco	-7..-34	`AAATAGAGATACGACACAACCTATATAA`	`9.7`
SigD	tlpB	Nos	-150..-177	`AGACGAAAAAATTGCGAGTCCGATAAAA`	`10.4`
SigD	tlpB	Tma	-84..-109	`TAATAACGATGATGTTACGGATATTA`	`10`
SigD	tlpC	Bsu	-31..-57	`TAAAACTTTTTTAAGCAGCCGATATAT`	`18.3`
SigD	tlpC	Bha	-34..-61	`TAAAAAATTTCCTCATGAACCGATAATA`	`13.8`
SigD	tlpC	Cac	-3..-34	`TAAATTCCTCCTTTGATTTTATACCAATATAA`	`12.7`
SigD	tlpC	Lin	-116..-144	`ACAATATCACCCATTTTACGCCGATATTC`	`12.6`
SigD	tlpC	Eco	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpC	EcZ	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpC	Ecs	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	tlpC	Ype	-192..-220	`TAAAGTTTCATCAACTCCTGCCGATAGAG`	`15.5`
SigD	tlpC	Sty	-81..-107	`TAAATGATTAAAGAAATGCCGATGTGA`	`13.8`
SigD	tlpC	Vch	-40..-68	`TTATTTAAAATAAATGCCCTCCGATAATA`	`10.1`
SigD	tlpC	Pae	-45..-73	`TAAACCTGGTGCCCCGCCTGCCGATAGAA`	`17.1`
SigD	tlpC	Rso	-60..-89	`TCAAGGTCTGCGCGCAAGTTGCCGATAGAC`	`13.2`
SigD	tlpC	Hpy	-55..-81	`TAAATGCACCCCCCCCCCCCGAAAAAT`	`11`
SigD	tlpC	jHp	-58..-85	`TAAATGCACCCCCCCCCCCCCGAAAAAT`	`11`
SigD	tlpC	Cje	-156..-182	`TAAATTTTTTAAATTATAACGATATTA`	`11.4`
SigD	tlpC	Atu	-153..-184	`TTAACTGCCGACATGCTTTGCCGCCGAAATAT`	`12.4`
SigD	tlpC	Ccr	-124..-152	`TAAACCATCCCCTCGTTCCCACGATATTG`	`9.7`
SigD	tlpC	Rco	-7..-34	`AAATAGAGATACGACACAACCTATATAA`	`9.7`
SigD	tlpC	Nos	-150..-177	`AGACGAAAAAATTGCGAGTCCGATAAAA`	`10.4`
SigD	tlpC	Tma	-84..-109	`TAATAACGATGATGTTACGGATATTA`	`10`
SigD	yvyC	Bsu	-32..-59	`TAATCTTATCTCGACTTAGTCGATATAA`	`14.8`
SigD	yvyC	Bha	-39..-67	`TAAAGTTTAGGAATGAGATACCGATATAA`	`16.5`
SigD	yvyC	Hpy	-68..-93	`ACAAATCGTTTTTATTGCCGATATTG`	`13.6`
SigD	yvyC	jHp	-67..-93	`TAACAAATCGTCTTTTTGCCGATATTA`	`16.6`
SigD	yvyC	Aae	-37..-65	`TAAAACTTTTTTCTTTTCCTCCGATAAAT`	`14.4`
SigD	yfmT	Bsu	-53..-81	`TCAATTTTATGCAAGATGAACCGATAGAA`	`13`
SigD	yfmT	Bha	-34..-61	`TAAAAAATTTCCTCATGAACCGATAATA`	`13.8`
SigD	yfmT	Spy	-25..-54	`TAATCTTATTATATCACTTTTCCGATATAA`	`15.6`
SigD	yfmT	Lin	-50..-75	`TATAACCCCATCTTAAGCCAATAAAA`	`11.2`
SigD	yfmT	Cgl	-99..-128	`TAAACACATCGAGAAAACGTGTCGATTTTT`	`9.8`
SigD	yfmT	Mtu	-30..-57	`TCATCGATTGGACACTTGTCCGATATTG`	`11.3`
SigD	yfmT	MtC	-67..-93	`TGATAGAGCCCACCCCAGCCGATAGGA`	`12.6`
SigD	yfmT	Eco	-205..-230	`TTAATGTTATATCTGCCCCGATAAAA`	`12.3`
SigD	yfmT	EcZ	-194..-225	`TTATCTGCCCCGTTTTAGCGGGGCAGATATAA`	`11`
SigD	yfmT	Ecs	-194..-225	`TTATCTGCCCCGTTTTAGCGGGGCAGATATAA`	`11`
SigD	yfmT	Ype	-212..-238	`TGAAATTAACATATATAGCCGCTAAAA`	`12.5`
SigD	yfmT	Pmu	-189..-220	`TAAAAATAAGCTGATGAAAAGGGGCGATAGTA`	`11.9`
SigD	yfmT	Hpy	-69..-95	`TAAAATTAAAAAACATTACCAATAAAT`	`10.4`
SigD	yfmT	jHp	-69..-95	`TAAAATTAAAAAACATTACCAATAAAT`	`10.4`
SigD	yfmT	Atu	-83..-112	`GCATTTTTATGCGTTTTAACGCCGAAATAA`	`9.8`
SigD	yfmT	Bme	-11..-40	`TCATTTCCGCCGGTTCCGCAGCCGATGTAG`	`10.9`
SigD	yfmT	Ccr	-22..-47	`TGAAGCGCTTCGCGGCGCCGATTATA`	`10.6`
SigD	yfmT	Syn	-125..-154	`AAATTTCCATAATGAAAATTGCCGAAAAAG`	`10.8`
SigD	yfmT	Nos	-71..-99	`TAAATCGCTTATGGGTGGTGACGATAAAA`	`14.3`
SigD	yfmT	Aae	-179..-204	`TAAAAAGTACAATCCGTCCTCTATAA`	`9.2`
SigD	yoaH	Bsu	-31..-57	`TAAAACTTTTTTAAGCAGCCGATATAT`	`18.3`
SigD	yoaH	Bha	-34..-61	`TAAAAAATTTCCTCATGAACCGATAATA`	`13.8`
SigD	yoaH	Cac	-3..-34	`TAAATTCCTCCTTTGATTTTATACCAATATAA`	`12.7`
SigD	yoaH	Lin	-116..-144	`ACAATATCACCCATTTTACGCCGATATTC`	`12.6`
SigD	yoaH	Eco	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	yoaH	EcZ	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	yoaH	Ecs	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	yoaH	Ype	-192..-220	`TAAAGTTTCATCAACTCCTGCCGATAGAG`	`15.5`
SigD	yoaH	Sty	-81..-107	`TAAATGATTAAAGAAATGCCGATGTGA`	`13.8`
SigD	yoaH	Vch	-40..-68	`TTATTTAAAATAAATGCCCTCCGATAATA`	`10.1`
SigD	yoaH	Pae	-45..-73	`TAAACCTGGTGCCCCGCCTGCCGATAGAA`	`17.1`
SigD	yoaH	Rso	-60..-89	`TCAAGGTCTGCGCGCAAGTTGCCGATAGAC`	`13.2`
SigD	yoaH	Hpy	-55..-81	`TAAATGCACCCCCCCCCCCCGAAAAAT`	`11`
SigD	yoaH	jHp	-58..-85	`TAAATGCACCCCCCCCCCCCCGAAAAAT`	`11`
SigD	yoaH	Cje	-156..-182	`TAAATTTTTTAAATTATAACGATATTA`	`11.4`
SigD	yoaH	Atu	-153..-184	`TTAACTGCCGACATGCTTTGCCGCCGAAATAT`	`12.4`
SigD	yoaH	Ccr	-124..-152	`TAAACCATCCCCTCGTTCCCACGATATTG`	`9.7`
SigD	yoaH	Rco	-7..-34	`AAATAGAGATACGACACAACCTATATAA`	`9.7`
SigD	yoaH	Nos	-150..-177	`AGACGAAAAAATTGCGAGTCCGATAAAA`	`10.4`
SigD	yoaH	Tma	-84..-109	`TAATAACGATGATGTTACGGATATTA`	`10`
SigD	yjbJ	Bsu	-57..-88	`TCAAGTTTCAGTTCTTTGCTCAGCCAATATAC`	`11.6`
SigD	yjbJ	Bha	-95..-120	`TATATTGCAAAGTCTTTTCGATAAAA`	`9`
SigD	yjbJ	Eco	-35..-64	`TCTTGTCATCGGCTCCGTTCGCCGTTATGA`	`9.2`
SigD	yjbJ	EcZ	-35..-64	`TCTTGTCATCGGCTCCGTTCGCCGTTATGA`	`9.2`
SigD	yjbJ	Ecs	-35..-64	`TCTTGTCATCGGCTCCGTTCGCCGTTATGA`	`9.2`
SigD	yjbJ	Hin	-144..-175	`AAAAACCTCAAAATGAAGCCACGCCGCTATAG`	`13.1`
SigD	yjbJ	Nme	-28..-53	`TCAAACAGTACCATCGGACGATAAAA`	`13`
SigD	yjbJ	NmA	-5..-31	`TAAAATATGTTTATTCCGCCGATATAA`	`19.3`
SigD	yjbJ	Rso	-82..-111	`TCAAGCCATCCCCGGGGATGGCCGATAAAA`	`16.7`
SigD	yjbJ	Mlo	-84..-112	`TAAACAAAGAGTTATCGAGGCCGCTCGAA`	`9.5`
SigD	yjbJ	Rco	-150..-178	`TAATTTGTTGGATATGGTACCCGATATAT`	`14.3`
SigD	yjbJ	Nos	-156..-183	`TAATTATGTTTCATCTATCCCCATAAAT`	`9.1`
SigD	yjbJ	Tma	-272..-300	`AAAACCCCGCCAAATGTGGCCCGATGTGA`	`9.5`
SigD	mcpA	Bsu	-31..-57	`TAAAACTTTTTTAAGCAGCCGATATAT`	`18.3`
SigD	mcpA	Bha	-34..-61	`TAAAAAATTTCCTCATGAACCGATAATA`	`13.8`
SigD	mcpA	Cac	-3..-34	`TAAATTCCTCCTTTGATTTTATACCAATATAA`	`12.7`
SigD	mcpA	Lin	-116..-144	`ACAATATCACCCATTTTACGCCGATATTC`	`12.6`
SigD	mcpA	Eco	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpA	EcZ	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpA	Ecs	-49..-77	`TAAAGATAACCGCAGCGGGGCCGACATAA`	`15`
SigD	mcpA	Ype	-192..-220	`TAAAGTTTCATCAACTCCTGCCGATAGAG`	`15.5`
SigD	mcpA	Sty	-81..-107	`TAAATGATTAAAGAAATGCCGATGTGA`	`13.8`
SigD	mcpA	Vch	-40..-68	`TTATTTAAAATAAATGCCCTCCGATAATA`	`10.1`
SigD	mcpA	Pae	-45..-73	`TAAACCTGGTGCCCCGCCTGCCGATAGAA`	`17.1`
SigD	mcpA	Rso	-60..-89	`TCAAGGTCTGCGCGCAAGTTGCCGATAGAC`	`13.2`
SigD	mcpA	Hpy	-55..-81	`TAAATGCACCCCCCCCCCCCGAAAAAT`	`11`
SigD	mcpA	jHp	-58..-85	`TAAATGCACCCCCCCCCCCCCGAAAAAT`	`11`
SigD	mcpA	Cje	-156..-182	`TAAATTTTTTAAATTATAACGATATTA`	`11.4`
SigD	mcpA	Atu	-153..-184	`TTAACTGCCGACATGCTTTGCCGCCGAAATAT`	`12.4`
SigD	mcpA	Ccr	-124..-152	`TAAACCATCCCCTCGTTCCCACGATATTG`	`9.7`
SigD	mcpA	Rco	-7..-34	`AAATAGAGATACGACACAACCTATATAA`	`9.7`
SigD	mcpA	Nos	-150..-177	`AGACGAAAAAATTGCGAGTCCGATAAAA`	`10.4`
SigD	mcpA	Tma	-84..-109	`TAATAACGATGATGTTACGGATATTA`	`10`

position : counted from translation start site.