SigG

We scaned SigG binding sites at upstream reagion of the ortholog genes by PSSM.

Transcription FactorRegulatec geneorganismpositioncis-elementsocre
SigGdacFBsu-32..-60GTATAAAACCATCACGCTTGGAAAAAATA11.6
SigGdacFBha-91..-119GTATAAAAAGTTCATGATAGGAAAAAATG8.4
SigGdacFCac-39..-68GAATATTTAATTTGAAAAATAGACAAAATA12.4
SigGdacFSpy-186..-214GTATAAAATGGAATCTAATCCTGAACTTA9
SigGdacFLin-197..-225TAATAAATCTATGGATAACCTTCAAAATA9.5
SigGdacFMtu-14..-42GAATAGGCCTACCGGAGCCCTGGAAGTTA8.5
SigGdacFMtC-14..-42GAATAGGCCTACCGGAGCCCTGGAAGTTA8.5
SigGdacFEco-97..-125GCATAAACTTTAAAAACTTTACCAACTTA11.3
SigGdacFEcZ-96..-124GCATAAACTTTAAAAACTTTACCAACTTA11.3
SigGdacFEcs-96..-124GCATAAACTTTAAAAACTTTACCAACTTA11.3
SigGdacFSty-58..-87GCAAAGTTTAATGATAATTTTGCAAAAATA9.5
SigGdacFHin-104..-132GCATAATCTAGCGGAATTGAAAAACGATA10.4
SigGdacFNme-155..-183GAAAAATATCCATGTCAAACCACAAAATA9.6
SigGdacFNmA-155..-183GAAAAATATCCATGTCAAACCACAAAATA9.6
SigGdacFRpr-226..-255ACATAAATATAAACAAAGCAGACAATACTA9
SigGdacFCpn-83..-112GAATTACCATAAATCAGAGGAAATATACTA8.2
SigGdacFBbu-22..-50GTATTGTAATTAACAATCAATAAATAATA9.9
SigGsigGBsu-38..-66GCATATTTTTCCCACCCAAGGAGATACTT9.6
SigGsigGCac-122..-150TCATATTCTTAATTTATTTTATAATACTA10.3
SigGsigGNos-189..-217GAATATTTTTCATTGAATAAATAAAAATA10.8
SigGsleBBsu-41..-69GTATAAAAATAACCTCGTTACAGAAAATA11.6
SigGsleBBha-89..-118GTATGATAGATATTTTTGGTGAAAAAATTA10
SigGsleBCac-209..-238GCATGTATGGTAACATTTACTTTAATAATA12.1
SigGsleBVch-205..-233GCATAATAAGCCCATTTTTCATCAATATA11.2
SigGsleBNos-238..-266GTTTACGTTGGCAAGCATAACACATCTTA8.5
SigGsleBBsu-41..-69GTATAAAAATAACCTCGTTACAGAAAATA11.6
SigGsleBBha-89..-118GTATGATAGATATTTTTGGTGAAAAAATTA10
SigGsleBCac-209..-238GCATGTATGGTAACATTTACTTTAATAATA12.1
SigGsleBVch-205..-233GCATAATAAGCCCATTTTTCATCAATATA11.2
SigGsleBNos-238..-266GTTTACGTTGGCAAGCATAACACATCTTA8.5
SigGspoIVBBha-81..-109TTATAACTGTTTCGGGATGAAAAAAGCTA8.1
SigGspoIVBCac-46..-75GCATAATTAAATTTTAAAATGGGAAATTTA8.5
SigGspoIVBLin-33..-62GCATGTCTATACCTATAATAACAAAAAAGA8.6
SigGspoIVBRpr-59..-87GTATAATTTAGTCATTATGAGTGATAATT8.3
SigGspoVTBsu-90..-118GTATATTACATTTGATGTGACGGATACTA12.5
SigGspoVTBha-73..-101GAATAGTTCTTCTGGAAACAAAGATACTA11.7
SigGspoVTCac-43..-72GCATAAAATTTCAAGATAAGTTGGATACTA13.2
SigGycxEBsu-37..-65GAATAATCACAACAATTCCAGCCAAAATA12.4
SigGycxESau-57..-85GCAAATAATGGTATCGTAGTGAAATAATA9.8
SigGyqfSCpn-143..-172GCATTCGGTTTTGTTCAAAACTCAAGAATA8.9
SigGywhEBsu-32..-61GTTTAAAAACGATCTTTTTTTCTCATAATA11.1
SigGywhEBha-45..-74GTTTAAAAGTCGCCGATTCTACCAATCCTA8.6
SigGywhECac-33..-61GAATAATTATACCACACATTATTATAATA9.6
SigGywhELla-45..-73GAATACAGCAATACCTTATTTTAATACTT8.1
SigGywhESau-257..-286GATTAAAATGTGATAAAATAACAAATGCTA8.1
SigGywhELin-229..-257GTATATAGGCGATTATTATTACCAAAACA8.9
SigGywhEEco-123..-152GCATCAGCGCGCACGTTCACCCTCACCCTA8.5
SigGywhENos-70..-99GAATGAATATGTCATATCAAAAACATAATA12.2

position : counted from translation start site.