SigK

We scaned SigK binding sites at upstream reagion of the ortholog genes by PSSM.

Transcription FactorRegulatec geneorganismpositioncis-elementsocre
SigKcotABsu-42..-68ACCATCACGTCCTTATTGTCATTAACT8.4
SigKcotAYpe-19..-44ACCCATGATCAGCATTTACTTATCAT9.1
SigKcotASty-55..-82ACTCCAAATTGCTAACGAATCATAAGGT10.1
SigKcotABme-120..-145ACGATTATTGTCTGGAGACTTATCAT9.1
SigKcotAMlo-64..-91ACGCGGTGTGCCAATATCGGCATTTGCA8.4
SigKcotFBsu-37..-62ACAACATTGAGCGTTGGGCATATGCT12.6
SigKcotFCac-144..-171ACTTTTTAAAAATTAAATATCATATATT10.4
SigKcotFEco-40..-65ACTATGCCCGATATCCTTCATACAAT10.6
SigKcotFEcZ-40..-65ACTATGCCCGATATCCTTCATACAAT10.6
SigKcotFEcs-40..-65ACTATGCCCGATATCCTTCATACAAT10.6
SigKcotFYpe-75..-101ACGCATGAGTGACAGGTTTAATACGCT9.1
SigKcotFSty-17..-44ACCTGTATCCGTGTTGGCTGCGTACTCT8.6
SigKcotFXfa-62..-89ACAATTATGAACGATAACCACATACACT10.5
SigKcotFCpn-74..-101TCTTCTGGCAATTCTTCCGCCATATCCT10
SigKcotHBsu-63..-88ACACTTTTTAAAACCGCGCGTACTAT8.7
SigKcotHMle-184..-210GCAACGTGGCGCGACCAGTCATTTGCT8.5
SigKcotHXfa-61..-86TCCAACAGATGCGTCCCACATATACT9.5
SigKcotHCcr-20..-47ACCTTTAGTCTTTCAACCTACATACCCT11
SigKcotHRco-23..-50ACTGTGCGGCAATCTCGTTAAATATCCT9.1
SigKcotHDra-141..-167ACAGACCAGATCATTCTGTCAAATGCT8.3
SigKcotMBsu-18..-44ACCCATTTATACTCCACCGCATATGAT12.7
SigKcotMBha-37..-63ACTTTCACCGACATTGAACCATATATA8.1
SigKcotMCac-152..-178TCTTTGACTTTCGTACTATCATATACT9.5
SigKcotMEco-28..-55CCTGCAAATCCGAAGATTCGCATATGCT9.8
SigKcotMEcZ-28..-55CCTGCAAATCCGAAGATTCGCATATGCT9.8
SigKcotMEcs-28..-55CCTGCAAATCCGAAGATTCGCATATGCT9.8
SigKcotMSty-68..-93ACAAGTTACGTTAATGAGAATAAGCT8.9
SigKcotMAtu-101..-128ACGCCGCGCATGACCATTCCCATTTTCT9
SigKcotMMlo-16..-42ACTGTCCTCTCAAGAGCGACATAAACT10.3
SigKcotMNos-67..-92ACACTCACCTGTTTTCTAAATATGAT10
SigKcotMTma-192..-219ACAGAACAAATTATAGCTCACTTTTGAT8
SigKcwlCBsu-34..-61ACTATGGGACAGGGTCGGGAAATATGAT10
SigKcwlCBha-37..-63TCGGTCGTGTTGGGACAATCATATGGT9.3
SigKcwlCCac-74..-101ACTAAAATGTTAAGGAGTTTCGTATATT8.9
SigKcwlCSau-249..-274ACCTGCTGAATGGATTATCTTATAAT8.6
SigKcwlCLin-39..-65TCTGACAGTAAAATGTTACCATAAAAT8.6
SigKcwlCEco-39..-66ACCGTCGTAACGGATTACGCGATACGAT8.2
SigKcwlCEcZ-39..-66ACGGTCGTAACGGATTACGCGATACGAT8.2
SigKcwlCEcs-39..-66ACGGTCGTAACGGATTACGCGATACGAT8.2
SigKcwlCYpe-140..-166ACGAAATTGATACTAACTGCATATATA8.1
SigKcwlCPae-11..-37ACCCGATTGCAAGGGTCGGCATTAGCT9.7
SigKcwlCPmu-49..-76ACCTTACTTTTCATCGATTACATAGTCT8.5
SigKcwlCSyn-79..-106TCCCTTCTACCATAGAAAAACATTCGCT8.1
SigKcwlCNos-259..-284ACATCTTATCAGTAGACAAATATGAT10
SigKftsYMpu-153..-179ACCATGAGTTATTTTATAACATTTTTT8.1
SigKftsYXfa-255..-280ACTGCGGTCTAGTTGGCACATATTCA8.6
SigKftsYRpr-42..-67ACTTCATTATAATTCCATCATACAGT9
SigKftsYRco-136..-163ACCTAATCGTCATTGCGAACCATAGGCT10.2
SigKftsYCtr-40..-65ACCCTTTAATTTTTCCTCCTTATCTT8.1
SigKftsYCpn-41..-66ACTCTTTGCTTTTTCCTTCTTATCTT8.1
SigKftsYTma-22..-49CCGACTAATATTAAGCATACCATACGTT8.1
SigKftsYFnu-49..-75ACTAGCCAGATTTTTTATTAATATTAT8.3
SigKftsYDra-23..-50ACTTGAGGGAAGTTCAGTTGCATAACTT9.9
SigKgerEBsu-69..-95ACCTCCTGCGCCCTTCTTACATATGAT12.7
SigKgerEBha-85..-111ACGTGTCTGATTTTCATCACATATACT11.3
SigKgerELla-14..-41ACTTATCTTATTATCATACTCATATCAT11.9
SigKgerESau-257..-283TCCTGTCATGTCAAACCGACATAACAT9.1
SigKgerECgl-245..-272ACAAGGCCAGCACAGACCACCATATCTA8.6
SigKgerEMtu-17..-42ACTATTGCACCCGGAAGTCGTATCTT9.4
SigKgerEMtC-17..-42ACTATTGCACCCGGAAGTCGTATCTT9.4
SigKgerEEco-130..-155ACTCATCGGGAAAAAAAACATAAATT9.4
SigKgerEEcZ-64..-91ACCTATATTGATATGTGCTACGTATCTT9.4
SigKgerEEcs-64..-91ACCTATATTGATATGTGCTACGTATCTT9.4
SigKgerEYpe-16..-43ACTTTATCCCTGCATGCAACCATACAAT10.6
SigKgerESty-10..-35ACCTGAATTGCAATGAATAATAAGAT9
SigKgerEVch-226..-252ACGCAAAAAGACTCTTATACATTTAAT9.5
SigKgerEPae-200..-226ACTTAACAATAGACCGCAGCGTTTGAT9.3
SigKgerEAtu-166..-193ACCAAAAATTATGGTTCAAAAATACGCT9.1
SigKgerEMlo-117..-142ACTCCCCGGACCTTCGATCATATGAA10.4
SigKgerENos-68..-95ACCTAATTACAATAATTTTACATTAGTT8.8
SigKspoIVCBBsu-43..-69ACAGACAGCCTCCCGGTCACATACATT9.6
SigKspoIVCBBha-127..-153ACTTCCTAACGAATTATGTAATATTCT8.2
SigKspoIVCBCac-163..-188ACGTTTTTTATAATTGGGCATTTTCT9
SigKspoIVCBNos-34..-59ACCAAATTGGAGTTGCGTAATATGTT9
SigKspoIVFABsu-99..-124ACTCCTCTCAAAAAAATACATATTTT10
SigKspoIVFABha-82..-108ACGTTTGAACTTTTTTAGTCATAATAT10
SigKspoIVFAMle-215..-240ACGATGAAACTGTAGTCACATACCCA8.7
SigKspoIVFAEco-68..-93ACTGGAAAAGATGTTCACGATACGCT8.1
SigKspoIVFAEcZ-50..-77TCGCTTAAAAAACAAGACGCCATATCAT10.1
SigKspoIVFAEcs-68..-93ACTGGAAAAGATGTTCACGATACGCT8.1
SigKspoIVFAYpe-27..-54ACCGTGTAAAGGTATTTGGACATATCGT10.3
SigKspoIVFAPmu-63..-88ACGGAATGTTAAAAAAGGCATATGAA10.4
SigKspoIVFAXfa-30..-56ACTCAACACCATGCCATCCCATCTGCT8.6
SigKspoIVFARso-107..-132ACCGAATAAAAGCACGGTCGTTCGAT8.5
SigKspoIVFAjHp-39..-64ACCTAAAAGCCTTTTTTACTTAAGCT8.8
SigKspoIVFAAtu-2..-29ACTAGCTGTGCCCCGTCGGTCATGCGCT8.9
SigKspoIVFACcr-75..-101GCCCGAAGGGAGCGCGAGTCATAAAAT8.2
SigKspoIVFARpr-179..-206ACATAGTATATAATTTTTATCATAATTT9
SigKspoIVFARco-116..-143ACAAATAGGAAAAGTCTAGGCATAATAT10
SigKspoIVFATpa-16..-41ACGAACGAACGCGTACTCAATACGCT9.1
SigKspoIVFABbu-103..-130ACAATCCGCTAAAACTATACCATTCGAT10
SigKspoIVFASyn-35..-61GCCAGGGAACAATTCTAGGCATACACT8.3
SigKspoIVFANos-86..-111ACTTTAATAGATGTCTTACATAAAAT10.4
SigKspoIVFAFnu-58..-84ACACTTCTTTACTGGAAATCATATATA8.1
SigKspoVKBsu-25..-50ACAATCGGCATCCGCTTGAATATCAT9.2
SigKspoVKBha-89..-114ACGGTAAAAATTGCTACACTTATACT8.5
SigKspoVKMtu-23..-48GCCCCGAAGTTAGCATTGCATAAGCT9.4
SigKspoVKMtC-141..-168ACAGTGCTCCTCTCAAGGTCCGTTTGAT9.3
SigKspoVKMle-121..-146ACCCAGTGCACCTTACTGAATACGAT9.2
SigKspoVKMlo-49..-75TCAATCCCCGGAAGCCCCACATATATT8.6
SigKspoVKNos-43..-70ACTTTCTTTAACCAAAATCCCATTTGAT10.8
SigKyfhPBsu-88..-113ACGATAAAAAATATCCCGCATAATTT9
SigKyfhPCac-61..-87ACCCATTAGAATCATCTAACTTATGAT9.9
SigKyfhPSau-7..-32ACACTCCTAATTTCGCACCTTATAAT8.6
SigKyfhPYpe-37..-62TCACGCCAAGAAAAATCTCATATACT9.5
SigKyqeEBsu-30..-55ACCTTGAAACCTTTCATTCTTATAAT8.6
SigKyqeEBha-136..-161ACCCCTGCATTTTTGTCTCATTCTCT8.2
SigKyqeECac-136..-163ACCATGTATTTCATTTTAAGCATATCAT11.9
SigKyqeESpn-71..-98ACAATCGCTTTTTTTGTGAAAATATAAT8.7
SigKyqeELin-37..-64ACTTTAATACTTCATGATACCATAATTT9
SigKyqeEEcs-11..-37GCAGATATCGGATCTTTGCCATAACCT8.6
SigKyqeEMlo-117..-144CCGAGAATGGAAGGATGGACCATACGTT8.1
SigKyqeENos-174..-201ACTATGAGTACAAAGATGAGCATTTGCT10.7
SigKyqeEBsu-30..-55ACCTTGAAACCTTTCATTCTTATAAT8.6
SigKyqeEBha-136..-161ACCCCTGCATTTTTGTCTCATTCTCT8.2
SigKyqeECac-136..-163ACCATGTATTTCATTTTAAGCATATCAT11.9
SigKyqeELin-37..-64ACTTTAATACTTCATGATACCATAATTT9
SigKyqeEEcs-11..-37GCAGATATCGGATCTTTGCCATAACCT8.6
SigKyqeEMlo-117..-144CCGAGAATGGAAGGATGGACCATACGTT8.1
SigKyqeERpr-27..-53ACTATTTATTATATAAACCAATATTAT8.3
SigKyqeERco-8..-34ACCTGCTATTTCGTCATTTCATTTAAT9.5
SigKyqeENos-174..-201ACTATGAGTACAAAGATGAGCATTTGCT10.7

position : counted from translation start site.