| Factor type | |
|---|---|
| SWISS-PROT | P17867 |
| SubtiList | BG10458 |
| Consensus seq. | (c/a)AC(c/a)(-35) - 16bp - CATA---TA(-10) |
| Comment | sigK is formed by a site-specific recombination event which joins the previously separated spoIVCB and spoIIIC genes into a single cistron. |
| Link to | Phylogenetic profile , Weight matrix & Motif alignment |
| Regulated gene |
Operon | Absolute position | Location | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|
| cgeA | cgeAB operon | 2147801..2147848 | ND | TTCGACTCATACCAAATAACAGCCGGAAGAATATGAATAACGTGAG TT |
ND | Roels S, et al. | 1995 |
| cgeC | cgeCDE | 2147692..2147739 | ND | CATAGCCTATACCATAAATCGAAGTCGCACATATTGTGAAACAGAG AT |
ND | Roels S, et al. | 1995 |
| cotA | ND | 684581..684628 | ND | ATTTTTTGTAACCATCACGTCCTTATTGTCATTAACTATAGTAC CAAT |
PE, beta-gal, other ND |
Sandman K, et al. Zheng L, et al. |
1988 1992 |
| cotB | ND | 3714945..3714991 | ND | TTGAATTAGTTCAACAAATAAATGTGACACGTATATATGCAGTATG T |
PE ND |
Zheng L, et al. |
1990 1992 |
| cotC | ND | 1904425..1904471 | ND | AACTGTCCAAGCCGCAAAATC-TACTCGCCGTATAATAAAGCGTAG TA |
PE, beta-gal | Zheng L, et al. |
1990 1992 |
| cotD | ND | 2332235..2332282 | ND | TTGCATCAGAACATGTACCCCTTATTTTTCATAACTTAGTATTGTA AT |
PE ND |
Zheng L, et al. Foulger D, et al. |
1992 |
| cotE | ND | 1774269..1774316 | ND | ATAAAAATGCACACTAGACAAATGCCCAGCATAAGATAACACGAAG AA |
PE ND |
Zheng L, et al. Foulger D, et al. |
1990 1991 |
| cotF | ND | 4166063..4166107 | ND | AACATCATGAACAACATTGAG-CGTTGGGCATATGCTGATATGGAA |
ND | Cutting S, et al. | 1991 |
| cotG | ND | 3716176..3716220 | -42:+3 | GAACACTTATACACTTTTTAA-AACCGCGCGTACTATGAGGGTA GT |
PE,beta-gal | Sacco M, et al. | 1995 |
| cotH | cotH | 3716208..3716267 | ND | CAATTTGAAATCCTCCTTTTAAAAATATGTTAAGGATGAAGATCC TTACTACCCTCATAG |
ND | Naclerio G, et al. | 1996 |
| cotM | ND | 1925257..1925309 | ND | TTATGCGTTCACCCATTTATACTCCACCGCATATGATGTAAAGCAA GGTTGAT |
ND | Henriques AO, et al. | 1997 |
| cotSA | cotSA-cotS-ytxO | 3160975..3161019 | ND | CCCATTCCGCACAAGTTGGTT-GTTCAGCCGTATCATGATTCTAAC |
ND | Takamatsu H et al. Takamatsu H et al. |
1998 2000 |
| cotT | ND | 1280301..1280358 | ND | ATTGTAGTAACATTTATTTCACATTTGTAATACTATGAGATTTAGAAGTT CATGTCAA |
ND PE, SDS-PAGE, other |
Aronson AI, et al. Bourne N, et al. |
1989 1991 |
| cotV | cotVWX | 1251348..1251395 | ND | TTTTATTATTCCGCTCTGCACCCCATTTGCATTATATAGAGTATGG AT |
PE ND |
Zhang J, et al. Roels S, et al. |
1994 1995 |
| cotX | ND | 1250503..1250550 | ND | TATGACTCAGTCAAAATAAGAGGCTCGCTCATTTAATAACAGTAAA AG |
PE ND |
Zhang J, et al. Roels S, et al. |
1994 1995 |
| cotY | cotYZ | 1249852..1249899 | ND | GTTCACCCACACCAAGTGGGGCACGGGTACATATGTTGTTAAGGAC TA |
PE ND |
Zhang J, et al. Roels S, et al. |
1994 1995 |
| cwlC | cwlC | 1872782..1872828 | ND | AATCGTACAAGCAGAAGCCGT-GTTTTTTCATATCCTGTAATGAGG TG |
PE, Northern blot, beta-gal | Kuroda A, et al. Roels S, et al. |
1993 1995 |
| cwlH | cwlH | -40:+14 | AAAGGCTGTCCATCTCTCTGTTTTCTGCATTCTTATTAATAGGG AGGGATAGAA |
beta-gal, PE, HM | Nugroho, F. A., et al. | 1999 | |
| ftsY | ND | 1668682..1668736 | -50:+5 | ACTCCAATACTTACGGGAGGAATACAGCTTGTCCTTTGAGGGGGCA AAAGAGAAA |
PE | Kakeshita, H., et al. | 2000 |
| gerE | ND | 2904075..2904122 | ND | TGTAAACGTCACCTCCTGCGCCCTTCTTACATATGATATCTCGACT AT |
ND | Cutting S, et al. Zheng L, et al. |
1989 1992 |
| spoIVCB | spoIVCB | 2652141..2652188 | ND | CGGTACAGACACAGACAGCCTCCCGGTCACATACATTTACATATAG GC |
ND | Kunkel B, et al. Zheng L, et al. |
1988 1992 |
| spoIVFA | ND | 2856882..2856928 | ND | TTCTTGACTAAACCGAATATTTGCCATGGACAAGACATATGATGTA C |
ND | Cutting S,et al. | 1991 |
| spoVFA | spoVFA-spoVFB-asd-dapG-dapA | 1743566..1743616 | -40:+10 | TTTTATATTCACCGGTATTTCCTTTTGATCATAAGATGAAGGGG AGCTTAA |
PE ND |
Chen NY, et al. Daniel RA, et al. |
1993 1993 |
| spoVK | ND | 1873339..1873385 | ND | GGCGTTTGTCACAATCGGCAT-CCGCTTGAATATCATATAGAGAGA AC |
ND | Foulger D, et al. Roels S, et al. |
1991 1995 |
| sspG | sspG-yurS | 3353030..3353072 | ND | CGTCCAATCTCTTTACTCTCCTATCGAATATCCTGTCACTATC |
ND | Bagyan I et al. | 1998 |
| yabG | ND | 51527..51572 | -42:+4 | TGTTTTGCGCACCACATGGACTGCCGCTACATAGGCTAGAGAAG GA |
PE | Takamatsu H et al. | 2000 |
| yfhP | yfhP | 934902..934939 | ND | GTTGTACACTAAGGGCACAGTAC-GATAATATGTTACAT |
PCR | Fujita, M. | 1999 |
| yfhP | yfhP | 934890..934928 | ND | AGGGCACAGTACGATAATATGTTACATTAAATAGTAATA |
PCR | Fujita, M. | 1999 |
| ykuD | ykuD | ND | ND | ND |
Northern hybridization | Kodama, et al. | 2000 |
| ykvP | ykvP-ykvQ | ND | ND | ND |
Northern hybridization | Kodama, et al. | 2000 |
| yoaN | yoaN | 2038004..2038055 | ND | TAGGCACAGCAATCTAAGATTCTGCATAGGCTGAAATAAAATCTTG TTCATT |
Northern blat, beta-gal, HM | Costa T, et al. | 2004 |
| yobW | ND | 2083364..2083415 | ND | ATTTCAGCTACTATTTCCGACCGGATAAGCATACACTTCTCAACGG AGGGGA |
ND | Henriques AO, et al. | 1997 |