We scaned Spo0A binding sites at upstream reagion of the ortholog genes by PSSM.
Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
---|
Spo0A | abrB | Bsu | -54..-60 | TGTCGAA | 9.7 |
Spo0A | abrB | Bha | -54..-60 | TGTCGAA | 9.7 |
Spo0A | dltA | Bsu | -192..-198 | TGTCGAA | 9.7 |
Spo0A | dltA | MtC | -231..-237 | TGTCGAG | 8.9 |
Spo0A | dltA | EcZ | -2..-8 | TGACGAA | 8.5 |
Spo0A | dltA | Mlo | -26..-32 | TGCCGAA | 8.5 |
Spo0A | kinA | Bsu | -45..-51 | TGTCGAA | 9.7 |
Spo0A | kinA | Bha | -14..-20 | TGACGAA | 8.5 |
Spo0A | kinA | Cac | -154..-160 | TGACGAA | 8.5 |
Spo0A | kinA | Mle | -104..-110 | TGTCGAA | 9.7 |
Spo0A | kinA | Eco | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinA | EcZ | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinA | Ecs | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinA | Ype | -2..-8 | TGCCGAA | 8.5 |
Spo0A | kinA | Pae | -152..-158 | TGTCGAG | 8.9 |
Spo0A | kinA | Xfa | -65..-71 | TGTCGAG | 8.9 |
Spo0A | kinA | Rso | -113..-119 | TGTCGAA | 9.7 |
Spo0A | kinA | Atu | -10..-16 | TGACGAA | 8.5 |
Spo0A | kinA | Sme | -61..-67 | TGTCGAG | 8.9 |
Spo0A | kinA | Mlo | -179..-185 | TGTCGAA | 9.7 |
Spo0A | kinA | Ccr | -29..-35 | TGTCGAA | 9.7 |
Spo0A | kinA | Rco | -167..-173 | TGACGAA | 8.5 |
Spo0A | kinA | Syn | -59..-65 | TGACGAA | 8.5 |
Spo0A | kinA | Nos | -157..-163 | TGTCGAA | 9.7 |
Spo0A | kinA | Fnu | -237..-243 | TGACGAA | 8.5 |
Spo0A | kinA | Dra | -130..-136 | TGTCGAA | 9.7 |
Spo0A | kinA | Bsu | -45..-51 | TGTCGAA | 9.7 |
Spo0A | kinA | Bha | -14..-20 | TGACGAA | 8.5 |
Spo0A | kinA | Cac | -154..-160 | TGACGAA | 8.5 |
Spo0A | kinA | Mle | -104..-110 | TGTCGAA | 9.7 |
Spo0A | kinA | Eco | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinA | EcZ | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinA | Ecs | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinA | Ype | -2..-8 | TGCCGAA | 8.5 |
Spo0A | kinA | Pae | -152..-158 | TGTCGAG | 8.9 |
Spo0A | kinA | Xfa | -65..-71 | TGTCGAG | 8.9 |
Spo0A | kinA | Rso | -113..-119 | TGTCGAA | 9.7 |
Spo0A | kinA | Atu | -10..-16 | TGACGAA | 8.5 |
Spo0A | kinA | Sme | -61..-67 | TGTCGAG | 8.9 |
Spo0A | kinA | Mlo | -179..-185 | TGTCGAA | 9.7 |
Spo0A | kinA | Ccr | -29..-35 | TGTCGAA | 9.7 |
Spo0A | kinA | Syn | -59..-65 | TGACGAA | 8.5 |
Spo0A | kinA | Nos | -157..-163 | TGTCGAA | 9.7 |
Spo0A | kinA | Dra | -130..-136 | TGTCGAA | 9.7 |
Spo0A | kinC | Bsu | -45..-51 | TGTCGAA | 9.7 |
Spo0A | kinC | Bha | -14..-20 | TGACGAA | 8.5 |
Spo0A | kinC | Cac | -154..-160 | TGACGAA | 8.5 |
Spo0A | kinC | Mle | -104..-110 | TGTCGAA | 9.7 |
Spo0A | kinC | Eco | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinC | EcZ | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinC | Ecs | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinC | Ype | -2..-8 | TGCCGAA | 8.5 |
Spo0A | kinC | Pae | -152..-158 | TGTCGAG | 8.9 |
Spo0A | kinC | Xfa | -65..-71 | TGTCGAG | 8.9 |
Spo0A | kinC | Rso | -113..-119 | TGTCGAA | 9.7 |
Spo0A | kinC | Atu | -10..-16 | TGACGAA | 8.5 |
Spo0A | kinC | Sme | -61..-67 | TGTCGAG | 8.9 |
Spo0A | kinC | Mlo | -179..-185 | TGTCGAA | 9.7 |
Spo0A | kinC | Ccr | -29..-35 | TGTCGAA | 9.7 |
Spo0A | kinC | Rco | -167..-173 | TGACGAA | 8.5 |
Spo0A | kinC | Syn | -59..-65 | TGACGAA | 8.5 |
Spo0A | kinC | Nos | -157..-163 | TGTCGAA | 9.7 |
Spo0A | kinC | Fnu | -237..-243 | TGACGAA | 8.5 |
Spo0A | kinC | Dra | -130..-136 | TGTCGAA | 9.7 |
Spo0A | kinC | Bsu | -45..-51 | TGTCGAA | 9.7 |
Spo0A | kinC | Bha | -14..-20 | TGACGAA | 8.5 |
Spo0A | kinC | Cac | -154..-160 | TGACGAA | 8.5 |
Spo0A | kinC | Mle | -104..-110 | TGTCGAA | 9.7 |
Spo0A | kinC | Eco | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinC | EcZ | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinC | Ecs | -115..-121 | TGTCGAA | 9.7 |
Spo0A | kinC | Ype | -2..-8 | TGCCGAA | 8.5 |
Spo0A | kinC | Pae | -152..-158 | TGTCGAG | 8.9 |
Spo0A | kinC | Xfa | -65..-71 | TGTCGAG | 8.9 |
Spo0A | kinC | Rso | -113..-119 | TGTCGAA | 9.7 |
Spo0A | kinC | Atu | -10..-16 | TGACGAA | 8.5 |
Spo0A | kinC | Sme | -61..-67 | TGTCGAG | 8.9 |
Spo0A | kinC | Mlo | -179..-185 | TGTCGAA | 9.7 |
Spo0A | kinC | Ccr | -29..-35 | TGTCGAA | 9.7 |
Spo0A | kinC | Syn | -59..-65 | TGACGAA | 8.5 |
Spo0A | kinC | Nos | -157..-163 | TGTCGAA | 9.7 |
Spo0A | kinC | Dra | -130..-136 | TGTCGAA | 9.7 |
Spo0A | spo0A | Bsu | -56..-62 | TGTCGAA | 9.7 |
Spo0A | spo0A | Bha | -47..-53 | TGTCGAA | 9.7 |
Spo0A | spo0A | Cac | -65..-71 | TGTCGAA | 9.7 |
Spo0A | spo0A | Eco | -115..-121 | TGTCGAA | 9.7 |
Spo0A | spo0A | EcZ | -115..-121 | TGTCGAA | 9.7 |
Spo0A | spo0A | Ecs | -115..-121 | TGTCGAA | 9.7 |
Spo0A | spo0A | Vch | -153..-159 | TGTCGAG | 8.9 |
Spo0A | spo0A | Pae | -79..-85 | TGTCGAA | 9.7 |
Spo0A | spo0A | Xfa | -65..-71 | TGTCGAG | 8.9 |
Spo0A | spo0A | Sme | -61..-67 | TGTCGAG | 8.9 |
Spo0A | spo0A | Bme | -98..-104 | TGACGAA | 8.5 |
Spo0A | spo0A | Mlo | -201..-207 | TGTCGAA | 9.7 |
Spo0A | spo0A | Ccr | -125..-131 | TGTCGAA | 9.7 |
Spo0A | spo0A | Syn | -217..-223 | TGACGAA | 8.5 |
Spo0A | spo0A | Nos | -119..-125 | TGTCGAA | 9.7 |
Spo0A | spo0F | Bsu | -56..-62 | TGTCGAA | 9.7 |
Spo0A | spo0F | Bha | -47..-53 | TGTCGAA | 9.7 |
Spo0A | spo0F | Cac | -65..-71 | TGTCGAA | 9.7 |
Spo0A | spo0F | Eco | -115..-121 | TGTCGAA | 9.7 |
Spo0A | spo0F | EcZ | -115..-121 | TGTCGAA | 9.7 |
Spo0A | spo0F | Ecs | -115..-121 | TGTCGAA | 9.7 |
Spo0A | spo0F | Vch | -153..-159 | TGTCGAG | 8.9 |
Spo0A | spo0F | Pae | -79..-85 | TGTCGAA | 9.7 |
Spo0A | spo0F | Xfa | -65..-71 | TGTCGAG | 8.9 |
Spo0A | spo0F | Sme | -61..-67 | TGTCGAG | 8.9 |
Spo0A | spo0F | Bme | -98..-104 | TGACGAA | 8.5 |
Spo0A | spo0F | Mlo | -201..-207 | TGTCGAA | 9.7 |
Spo0A | spo0F | Ccr | -125..-131 | TGTCGAA | 9.7 |
Spo0A | spo0F | Syn | -217..-223 | TGACGAA | 8.5 |
Spo0A | spo0F | Nos | -119..-125 | TGTCGAA | 9.7 |
Spo0A | spoIIAA | Bsu | -87..-93 | TGCCGAA | 8.5 |
Spo0A | spoIIE | Pae | -79..-85 | TGTCGAA | 9.7 |
Spo0A | spoIIE | Sme | -52..-58 | TGCCGAA | 8.5 |
position : counted from translation start site.