We scaned SpoIIID binding sites at upstream reagion of the ortholog genes by PSSM.
| Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
|---|
| SpoIIID | cotA | Xfa | -64..-72 | GGGACAGGC | 12.1 |
|---|
| SpoIIID | cotA | Rso | -2..-10 | AGAACAGCC | 9.8 |
|---|
| SpoIIID | cotA | Nos | -93..-101 | AGGAAAGGC | 9.3 |
|---|
| SpoIIID | gerE | EcZ | -116..-124 | AAGACAAGC | 10 |
|---|
| SpoIIID | gerE | Ecs | -221..-229 | AAGACAAGC | 10 |
|---|
| SpoIIID | gerE | Sty | -276..-284 | TTGACAGGC | 9.5 |
|---|
| SpoIIID | gerE | Vch | -82..-90 | AGGACAAGT | 10.2 |
|---|
| SpoIIID | gerE | Pae | -124..-132 | AGGACAGGC | 12.7 |
|---|
| SpoIIID | gerE | Rso | -23..-31 | TGAACAGCC | 9.6 |
|---|
| SpoIIID | gerE | Mlo | -121..-129 | AGGACCGGC | 9.2 |
|---|
| SpoIIID | spoIVCA | EcZ | -176..-184 | AGGACAACC | 10.3 |
|---|
| SpoIIID | spoIVCA | Ecs | -176..-184 | AGGACAACC | 10.3 |
|---|
| SpoIIID | spoIVCA | Vch | -46..-54 | AAAACAGGC | 9.5 |
|---|
| SpoIIID | spoIVCA | Rso | -150..-158 | CGGACAAGC | 10.5 |
|---|
| SpoIIID | spoIVCA | Mlo | -221..-229 | AAAACAGGC | 9.5 |
|---|
| SpoIIID | spoIVCB | Ype | -2..-10 | GAGACAGGC | 10.4 |
|---|
| SpoIIID | spoVD | Bsu | -50..-58 | TGGACAGGT | 11 |
|---|
| SpoIIID | spoVD | Tma | -79..-87 | AAGACAGCC | 9.6 |
|---|
| SpoIIID | spoVD | Dra | -77..-85 | AGGAAAGGC | 9.3 |
|---|
position : counted from translation start site.