| Factor type | Unique(DeoR FAMILY) |
|---|---|
| SWISS-PROT | P15281 |
| SubtiList | BG10408 |
| Consensus seq. | WWRRACAR-Y |
| Comment | A bi-functional transcription factor which regulates temporal expression of many genes in the mother cell as well as GerE |
| Link to | Phylogenetic profile , Weight matrix & Motif alignment |
| Regulated gene |
Operon | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|---|---|
| bofA | ND | SigE | Negative | 29725..29751 | -17:+10 | TCTCATAAGCTTGTACTAGAACAAGCG |
FT RO | Halberg R, et al. | 1994 |
| bofA | ND | SigE | Negative | 29795..29814 | +54:+73 | TTATTTTAGGACTGGTTATT |
FT RO | Halberg R, et al. | 1994 |
| cotA | ND | ND | Negative | ND | ND | ND |
RO | Halberg R et al. | 1995 |
| cotC | ND | ND | Negative | 1904446..1904516 | -86:-16 | TCTTTTTCTATCATTTGGACAGCCCTTTTTTCCTTCTATGATTTTAA CTGTCCAAGCCGCAAAATCTACTC |
GS, FT | Ichikawa, H., et al. | 2000 |
| cotD | ND | SigK | Negative | 2332300..2332318 | -79:-61 | AAAGACAGCTTAATTGCAC |
FT RO | Halberg R, et al. | 1994 |
| cotD | ND | SigK | Negative | 2332262..2332276 | -37:-23 | CAGAACATGTACCCC |
FT RO | Halberg R, et al. | 1994 |
| cotD | ND | SigK | Negative | 2332167..2332186 | +72:+54 | aTGGACAATTGGCGCCATCA |
FT RO | Halberg R, et al. | 1994 |
| cotX | ND | ND | Negative | 1250513..1250542 | -35:-7 | AGTCAAAATAAGAGGCTCGCTCATTTAATA |
GS, FT | Ichikawa, H., et al. | 2000 |
| gerE | ND | ND | Positive | ND | ND | ND |
RO | Halberg R et al. | 1995 |
| spoIVCA | ND | SigE | Positive | 2654223..2654256 | -47:-12 | TTAAAATCTCCTCATTTGGACAAACAGCTGTTAC |
FT RO | Halberg R, et al. | 1994 |
| spoIVCA | ND | SigE | Positive | 2654057..2654074 | +137:+154 | CGACCGAGGAACAAGCGA |
FT RO | Halberg R, et al. | 1994 |
| spoIVCB | ND | SigE | Positive | 2652144..2652164 | -39:-19 | TACAGACACAGACAGCCTCCC |
FT RO | Halberg R, et al. | 1994 |
| spoIVCB | ND | SigE | Positive | 2652257..2652273 | +91:+75 | AAAAGACAAGCTCTTTA |
FT RO | Halberg R, et al. | 1994 |
| spoIVCB | ND | SigE | Positive | 2652288..2652308 | +106:+126 | AAAAACAATGCCTTTCCACAA |
FT RO | Halberg R, et al. | 1994 |
| spoVD | ND | SigE | Negative | 1583457..1583475 | -15:-33 | TGAATTTGGACAGGTAGAA |
RO FT GS | Zhang B, et al. | 1997 |
| spoVD | ND | SigE | Negative | 1583481..1583497 | -9:+8 | AAAATGAAACAAGCCTA |
RO FT GS | Zhang B, et al. | 1997 |