| Factor type | LuxR/UhpA FAMILY |
|---|---|
| SWISS-PROT | P13800 |
| SubtiList | BG10393 |
| Consensus seq. | AGAA -----N11----- TTCAG |
| Comment | pleiotropic regulator involved in various post-exponential phase responses makes a two component system with DegS kinase |
| Link to | Phylogenetic profile , Weight matrix & Motif alignment |
| Regulated gene |
Operon | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|---|---|
| aprE | ND | ND | Positive | 1105091..1105117 | -188:-162 | ACCTAAAAAAGCATGACAT--TTCAGCAT |
Other | Dartois V, et al. | 1998 |
| comC | ND | ND | Positive | 2864498..2864524 | -100:-74 | CGGCAGAATCAAAAAAAGA--TTCTGCCG |
Other | Dartois V, et al. | 1998 |
| comEA | comEA | ND | Positive | 2640615..2640641 | 284:310:translation start site | AAATAAAAATCATCTCGTT--TTCAGAAA |
Other | Dartois V, et al. | 1998 |
| comFA | comFA-comFB-comFC | SigA | Positive? | ND | ND | ND |
DB | Londono-Vallejo JA, et al. | 1993 |
| comGA | ND | ND | Positive | 2559397..2559423 | -94:-68 | TGCCAGAAAGAATTGGTTT--TTCAGCAT |
Other | Dartois V, et al. | 1998 |
| comK | ND | SigA | Positive | 1116275..1116300 | ND | TTATTACTAGTCATTTAGTACCATTA |
FT, GS DB |
Hamoen, L. W., et al. Ogura M, et al. |
2000 1996 |
| degQ | ND | ND | Positive? | 3256498..3256524 | -173:-147 | ATTAAGAATCTTTCTCAAT--TTCAGCAC |
Other | Dartois V, et al. | 1998 |
| degR | ND | SigD | Positive? | 2307861..2307886 | -286:-261 | ATCGAGAGCTGCCAGCTC---TTCAGATT |
Other | Dartois V, et al. | 1998 |
| degU | ND | ND | Positive? | 3644515..3644540 | 214:239;translational start site | GAGAAGAAAAACAAATCA---TTCGGCTT |
Other | Dartois V, et al. | 1998 |
| mecA | ND | ND | Negative | 1228243..1228269 | -85:-59 | AAATAGAAATACAAAGGAA--TTCACACT |
Other | Dartois V, et al. | 1998 |
| sacB | ND | ND | Positive | 3534715..3534743 | -128:-100 | GAAAAGAAACAGATAGATTTTTTTAGTCT |
Other | Dartois V, et al. | 1998 |
| sacB | ND | ND | Positive | 3534725..3534750 | -118:-92 | AGATAGATTTTTTAGTTC--TTTAGGCC |
Other | Dartois V, et al. | 1998 |
| sacX | sacX-sacY | ND | Positive? | 3941212..3941238 | +245:+271 | ATGAACAAGCCGACTTTTC--TTCAGCAA |
Other | Dartois V, et al. | 1998 |
| srfAA | srfAAB-comS-srfACD | SigB | Positive? | 387132..387158 | 168:184;translation start site | TGAAAAAACAGTACAAACA--TTCAGTGA |
Other | Dartois V, et al. | 1998 |
| wapA | ND | SigA | Negative | 4029617..4029643 | -42:-16 | AAAAATATTGTAATGATAT--TTCAGTCT |
DP SDM | Dartois V, et al. | 1998 |
| yxjJ | yxjJI | ND | Negative | 3995500..3995526 | 347:373;translation start site | AAAAAGAAATCCAGCCCAT--TTCAAAAA |
Other | Dartois V, et al. | 1998 |