Regulated gene:comK
| Direction | + |
|---|---|
| Start position | 1116581..1117159 |
| Operon | ND |
| Transcription start site | |
| COG ID | COG4903 |
| Profile | competence transcription factor (CTF) |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|
| AbrB | Negative | ND | 1116296..1116415 | CATTAAATATCATTAAAAGATGATTTTATCTTAAATGTTAAAAAAACCTG TCGTTTTACAAAAACAGATGATAGATTATTAGTATAAATTTTGCAGAAAA AGGATGGAGGCCATAATATG |
FT | Hamoen, L. W., et al. | 2003 |
| CodY | Negative | -77:+13 | 1116300..1116364 | AAATATCATTAAAAGATGATTTTATCTTAAATGTTAAAAAAACCTGTCGT TTTACAAAAACAGAT |
DB FT GS | Serror P, et al. | 1996 |
| ComK | Positive | -118:-55 | 1116259..1116322 | TGAAAGTAAAATCGGTTTATTACTAGTCATTTAGTACCATTAAATA TCATTAAAAGATGATTTT |
FT AR, HM |
Hamoen LW, et al. Berka, R. M., et al. |
1998 2002 |
| DegU | Positive | ND | 1116275..1116300 | TTATTACTAGTCATTTAGTACCATTA |
FT, GS DB |
Hamoen, L. W., et al. Ogura M, et al. |
2000 1996 |
| Med | Positive | ND | ND | ND |
DP | Ogura M et al. | 1997 |
| Rok | Negative | ND | ND | ND |
gel shift | Hoa, T. T., et al. | 2002 |
| SigA | ND | ND | 1116276..1116396 | TATTACTAGTCATTTAGTACCATTAAATATCATT AAAAGATGATTTTATCTTAAATGTTAAAAAAACCTGTCGTTTTAC--A AAAACAGATGATAGATTATTAGTATAAATTTTGCAGAAAAA |
PE | van Sinderen D,et al. | 1994 |
| SinR | Positive | ND | ND | ND |
DB | Hahn J, et al. | 1994 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2003
Contact: knakai@ims.u-tokyo.ac.jp