| Factor type | |
|---|---|
| SWISS-PROT | P17869 |
| SubtiList | BG10159 |
| Consensus seq. | AGGTATT(-35) , GAATT(-10) |
| Comment | RNA Polymerase Sigma-30 Factor (Sigma-H) Non-essential sigma factor involved in expression of vegetative and early stationary-phase geneS |
| Link to | Phylogenetic profile , Weight matrix & Motif alignment |
| Regulated gene |
Operon | Absolute position | Location | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|
| citG | citG | 3389466..3389513 | ND | AAAAATAAAAAGGATTTTTTGTGTCATTGG-CGAATTATGATCTA TTGA |
S1 ND |
Feavers IM, et al. Predich M, et al. |
1988 1992 |
| dnaG | dnaG-rpoD | 2602579..2602627 | ND | CGATGAAGGGATTTTGCACTAAAGCATCGAATAATGTACGACGG AGTGT |
PE,beta-gal ND |
Qi FX, et al. Kiel JA, et al. |
1990 1991 |
| dnaG | dnaG-rpoD | 2603069..2603119 | -46:+5 | GCTTTTATGCAGGAGTTTAATGGAGGGATGGAGAATTACTCTTCTT AATGA |
PE ND |
Carter HL 3rd, et al. Predich M, et al. |
1988 1992 |
| ftsA | ftsA-ftsZ | 1595592..1595641 | -42:+8 | GATATAAAAGAGGATATACATAGGATATAA-CGAATATTTTCAAT AAACAT |
ND lacZ assay |
Predich M, et al. Fukuchi K, et al. |
1992 2000 |
| kinA | kinA | 1469231..1469275 | ND | TAAGAATAGAAGGAGAATACTCATTTTCTAGCGAATCATACTAGG |
ND | Predich M, et al. | 1992 |
| lytE | ND | 1018233..1018268 | ND | AAAAAAAGAGATACATATATATAGAGTTAACATTTG |
PE | Ishikawa S et al. | 1998 |
| minC | minC-minD | 2858506..2858547 | ND | GTAAAAAGGATTTTATCTTTTTTTGACGAAATGAGTATGTTG |
Wu JJ, et al. Lee S, et al. |
1991 1993 |
|
| phrC | phrC | 429408..429450 | -40:+3 | TAGAGGATTTAGCCCTAGAAGTAGCAAAATATTACTATGAACA |
PE PE, beta-GAL |
Carter HL 3rd, et al. McQuade, R. S., et al. |
1990 2001 |
| phrE | ND | 2659450..2659490 | -36:+5 | GTTAGGAGGCAACCTTTTCGAT--TATAATGGGAAAATAGAGG |
PE, beta-GAL | McQuade, R. S., et al. | 2001 |
| phrE | ND | 2659485..2659526 | -39:+4 | TAGAGGATAGTATCATCTGTTTC-AAGAAGATGGTATATGCTC |
PE, beta-GAL | McQuade, R. S., et al. | 2001 |
| phrF | ND | 3846030..3846070 | -36:+5 | TTGAAGATTTCGCTATTGATGTGGCAAAATATTATCATGAA |
PE, beta-GAL | McQuade, R. S., et al. | 2001 |
| phrG | ND | 4140105..4140146 | -38:+4 | TGAAGGAAAAATTGACTGCTGAG-CCGAATAGAATATGTGAGG |
PE, beta-GAL | McQuade, R. S., et al. | 2001 |
| phrI | ND | 547916..547958 | -40:+5 | ACAAGGAAATTTAATGCTCTCTA-ATGAATATTATCGTATGA T |
PE, beta-GAL | McQuade, R. S., et al. | 2001 |
| phrK | ND | 2062199..2062240 | -38:+4 | CACAGGAAAGACTCATATTAATG-GAGAATAAAGTATACGAAG |
PE, beta-GAL | McQuade, R. S., et al. | 2001 |
| spo0A | spo0A | 2518102..2518148 | ND | ATTTTTTTAGAGGGTATATAGCGGTTTT-GTCGAATGTAAACATGT AG |
ND | Predich M, et al. | 1992 |
| spo0F | spo0F | 3808989..3809032 | ND | TTATAATTAAAGGAAATAGGAAAATCAAAC-AGAATACATACAAT |
ND | Predich M, et al. | 1992 |
| spo0M | spo0M | 953533..953574 | ND | AATAATAGGAAAAAAGTATGAATCAAACGAATCTTTTTTCCT |
Han WD, et al. | 1998 | |
| spoIIAA | spoIIAA-spoIIAB-sigF | 2444210..2444258 | ND | GTCACGGTGAAGGAATTCATTCCGTCGAAATCGAAACACTCATTAT CCG |
beta-gal, PE | Wu JJ, et al. Wu JJ, et al. Predich M, et al. |
1989 1991 1992 |
| spoVG | spoVG | 55785..55831 | ND | AAAAACGAGCAGGATTTCAGAAAAAATCGT-GGAATTGATACACT AAT |
Predich M, et al. | 1992 | |
| spoVS | spoVS | 1769042..1769083 | ND | AAAAGCAGGAATATAGCAACTCCTTAGTGAATATAGTAAAAA |
Resnekov O, et al. | 1995 | |
| ureA | ureABC | 3768397..3768444 | -44:+4 | AACAATTGGAAGGAATTCAGATTTTAATTGTCGAACTAGTCAGAC AAG |
PE, beta-gal | Wray LV Jr, et al. | 1997 |
| yoxA | yoxA-dacC | 2000093..2000127 | ND | TATTTGATAGGGGAAAATATAAAATGGAGGAAATATGGTACAGTA |
beta-gal, SDS-PAGE | Pedersen LB, et al. | 1998 |
| yqxM | yqxM-sipW-tasA | ND | ND | ND |
Western blot beta-gal |
Stover AG, et al. Stover AG, et al. |
1999 1999 |
| ytxG | ytxGHJ | 3047136..3047185 | ND | AAAGCTTATTAAAGGATTTTCTTACATAACGGAGAATAGTATGTAT ACAG |
PE | Varon D, et al. | 1996 |
| yvyD | yvyD | 3630626..3630669 | -39:+5 | CAGCAGGAATTGTAAAGGGTAAAAGAGAAATAGATACATATCCT |
PE PE |
Drzewiecki K et al. Eymann C, et al. |
1998 2001 |