| bsaA | CAAAGATGTA---AGAGGGAAT---TGTAATGTTTTATA----GAAT---GA------------ |
| ccdA | TTTCAAATGA---GAAGGAGTA---TAATGTCTCAATGTC---AAAT---TA------------ |
| citG | --AAAAATAA---AAAGGATTT---TTTGTGTCATTGGC----GAAT---TATGATCTATTGA- |
| ftsA | --GATATAAA---AGAGGATAT---ACATAGGATATAAC----GAAT---ATTTTCAAT----- |
| gltP | TAACTTGAAA---AAAGGTGTT---TGCATTTGAATCAC----GAAT---GA------------ |
| kinA | --TAAGAATA---GAAGGAGAA---TACTCATTTTCTAGC---GAAT---CATACTAGG----- |
| lytE | TTAATTTAAA---AAAAGAGAT---ACATATATATAGAGT---TAAC---ATTTG--------- |
| minC | ------GTAA---AAAGGATTT---TATCTTTTTTTGAC----GAAA---TGAGTATGTTG--- |
| phrC | ACGCTGATAT---AGAGGATTT---AGCCCTAGAAGTAGC---AAAA---TATTACTATGA--- |
| phrE | GCTGGCATTG---TTAGGAGGC---AACCTTTTCGATTA----TAAT---GGGAAAAT------ |
| phrE | ATGGGAAAAT---AGAGGATAG---TATCATCTGTTTCAA---GAAG---ATGGTATAT----- |
| phrF | ATGCTGATCT---TGAAGATTT---CGCTATTGATGTGGC---AAAA---TATTATC------- |
| phrG | ACCAAGACGT---GAAGGAAAA---ATTGACTGCTGAGCC---GAAT---AGAATATGT----- |
| phrI | TTTTCATGAA---CAAGGAAAT---TTAATGCTCTCTAAT---GAAT---ATTATCGTATGAGT |
| phrK | ACAATAAAGC---ACAGGAAAG---ACTCATATTAATGGA---GAAT---AAAGTATAC----- |
| sigA | GTCGAACGAT---GAAGGGATT---TTGCACTAAAGCATC---GAAT---AATGTACGACGG-- |
| sigA | --GCTTTTAT---GCAGGAGTT---TAATGGAGGGATGGA---GAAT---TACTCTTCTTAAT- |
| spo0A | --ATTTTTTT---AGAGGGTAT---ATAGCGGTTTTGTC----GAAT---GTAAACATGTAG-- |
| spo0F | --TTATAATT---AAAGGAAAT---AGGAAAATCAAACA----GAAT---ACATACAAT----- |
| spo0M | ------AATA---ATAGGAAAA---AAGTATGAATCAAAC---GAAT---CTTTTTTCCT---- |
| spoIIAA | --GTCACGGT---GAAGGAATT---CATTCCGTCGAAATC---GAAA---CACTCATTATCCG- |
| spoVG | --AAAAACGA---GCAGGATTT---CAGAAAAAATCGTG----GAAT---TGATACACTAAT-- |
| spoVS | ------AAAA---GCAGGAATA---TAGCAACTCCTTAGT---GAAT---ATAGTAAAAA---- |
| ureA | --AACAATTG---GAAGGAATT---CAGATTTTAATTGTC---GAAC---TAGTCAGACAAG-- |
| vpr | CCAAATGACA---CAAGGATTT---TTTTGAATTTTCAA----GAAA---TA------------ |
| ycsN | AAAAGGAGCG---AAAGGAAAA---AGGGGATCTGAGGCC---GAAT---GA------------ |
| yesL | TCACAGACCG---GCAGGAATT---TTCTTTCGAAAGGA----GAAA---TA------------ |
| yhaR | TGAAAAATAA---AAAGGTTTA---TTTGGGGATGGCGGG---GAAT---GT------------ |
| yhcR | CAGAAGCCTG---AAAGGAATT---ATATGCTGTCTGTC----GAAA---TG------------ |
| yisK | GAATTGAGAA---AAAGGGATT---TCAGCATTCGACAGA---GAAT---AC------------ |
| yisT | TTTTGCAATT---GAAGGAGAA---ACAGATGAAAAAAAC---GAAT---TT------------ |
| ykoM | TTTGCTTTTA---GAAGGAATT---TCTCGAATTATAGC----GAAT---AC------------ |
| ykrQ | TAGGGCAAAT---GAAGGAAGT---TCCCGCATTTTGTA----GAAA---TA------------ |
| ymaH | CACACATATA---GCAGGAAAA---CTCGAACTTTAATC----GAAA---CT------------ |
| ynaD | ACCCCTCAGA---GAAGGATAG---GGGGATTATTTTGGA---GAAT---CA------------ |
| yobO | TATAAATCCT---AAAGGAATT---TTGTAACAAATACA----GAAT---TG------------ |
| yoeA | GAAGAATCGG---GAAGGGTTT---CATAAGTGCAGTGAT---GAAT---AA------------ |
| yojL | GAATGCAGAG---GAAGGGATT---TGACACGCCGATAGA---GAAT---TG------------ |
| ypiB | GAGCTTGAAG---AAACGATTT---TGCGAATCGAGGAT----GAAT---TT------------ |
| yrvJ | TAAAAATCAG---AAAGGACTT---TACGATATTAAACAA---GAAT---GC------------ |
| yttP | ATAAGTTCTT---ACAGGAACA---GCGGCTTTCTGCTT----GAAT---AG------------ |
| ytxG | AAAGCTTATT---AAAGGATTT---TCTTACATAACGGA----GAAT---AGTATGTATACAG- |
| yuxI | TTATTTTTTA---AAAGGAAAA---AAGAGACCATTTCAC---GAAT---TA------------ |
| yuxL | TGCTGGAGAT---AAAGGAGTT---TTTATTTAGAAAAAC---GAAA---TA------------ |
| yveK | TCGTTCATTA---TAAGGAATT---TTTCGTTCTTTATA----AAAT---TT------------ |
| yvyD | TTATGTTTCA---GCAGGAATT---GTAAAGGGTAAAAGA---GAAA---TAGATACA------ |
| ywfB | AACCCTTTTT---AAAGGGTTT---TTTTGTTTGTATGG----GAAT---AA------------ |
| ywfF | GAACTGAAAG---GCAGTAATT---CACAGGATGTGGCT----GAAT---CA------------ |
Link to : Weight matrix