Regulated gene:spoIVCB

Direction +
Start position 2652262..2652732
Operon ND
Transcription start site 1877107
COG ID COG1191
Profile RNA polymerase sporulation-specific sigma factor (sigma-K) (N-terminal half)


Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Exp. Reference Year
GerE Negative -12:+19 2652171..2652201 ATACATTTACATATAGGCTTTTGCCTACATA
FT
FT
Ichikawa H et al.
Coppee, J. Y., et al.
1999
2001
GerE Negative -4:+28 2652179..2652210 ACATATAGGCTTTTGCCTACATACTTTTGTGG
FT Ichikawa H et al. 1999
SigE ND ND 2652145..2652186 ACAGACACAGACAGCCTC-CCGGTCACATACATTTACATATAG
ND Kunkel B, et al.
Roels S, et al.
1988
1992
SigK ND ND 2652141..2652188 CGGTACAGACACAGACAGCCTCCCGGTCACATACATTTACATATAG
GC
ND Kunkel B, et al.
Zheng L, et al.
1988
1992
SpoIIID Positive -39:-19 2652144..2652164 TACAGACACAGACAGCCTCCC
FT RO Halberg R, et al. 1994
SpoIIID Positive +91:+75 2652257..2652273 AAAAGACAAGCTCTTTA
FT RO Halberg R, et al. 1994
SpoIIID Positive +106:+126 2652288..2652308 AAAAACAATGCCTTTCCACAA
FT RO Halberg R, et al. 1994


spoIVCB nucB Transcription start site Transcription start site Transcription start site Transcription start site SigK SpoIIID SpoIIID SpoIIID GerE SigE genome sequence base colors







Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2003
Contact: knakai@ims.u-tokyo.ac.jp