Transcription factor: TraP

Factor type TRAP
SWISS-PROT P19466
SubtiList BG10278
Consensus seq. (G/U)AG repeats
Comment tryptophan operon RNA-binding attenuation protein (TRAP)
regulation of tryptophan biosynthesis (required for transcription (and translation) attenuation
Link toPhylogenetic profile

Regulated
gene
Operon Sigma Regulation Absolute position Location Binding seq.(cis-element) Exp. Reference Year
pabA ND ND ND 84233..84290 ND GAGCATTAGAGCTGAGCGAAGAAGAGACAAAAATTAGA
TGAGGTGAGCGGAGAAATGA
ND Babitzke, P., et al. 2001
trpE trpEDCFBA ND ND 2376728..2376783 ND TAGAATGAGTTGAGTTAGAGAATAGGGTAGCAGAGA
ATGAGTTTAGTTGAGCTGAG
ND Babitzke, P., et al. 2001
trpE trpEDCFBA ND Positive 2376731..2376760 +69:+78 AGGGTAGCAGAGAATGAGTTTAGTTGAGCT
DP HB Kuroda MI, et al. 1988
ycbK ND ND ND 277307..277365 ND AAGTAAAGGAGAAAAGCTGAGCTGAGATGAGAGCAG
AAGAGCAGAGTAAGATTCGTGAG
ND Babitzke, P., et al. 2001
yhaG ND ND Positive 1074448..1074522 +30:+105 AATGATGAGCATATTATTGGAGGGCAAAAAGCTTAGCAGAG
GAGAGCATAGTTATGAAAACAAAAGAGTTAGTCA
PE, beta-gal Sarsero, J. P., et al. 2000




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2004
Contact: knakai@ims.u-tokyo.ac.jp