Transcription factor: Xre

Factor type Xre
SWISS-PROT P23789
SubtiList BG10994
Consensus seq.
Comment repressor of a phage-like bacteriocin, PBSX (phibacin
damaged-prophage)
helix-turn-helix protein
acts at the operator-promoter region
Link toPhylogenetic profile , Weight matrix & Motif alignment

Regulated
gene
Operon Sigma Regulation Absolute position Location Binding seq.(cis-element) Exp. Reference Year
xkdB ND ND Negative 1321082..1321105 (probably) around -20 GATGATACAGAATGTATCGTTTAT
GS, FT McDonnell GE, et al. 1994
xkdB ND ND Negative 1321115..1321142 (probably) around -20 CATCCGATACAAAATGTATCAAAAAAGA
GS, FT McDonnell GE, et al. 1994
xre ND ND Negative 1321023..1321047 (probably) around -20 TTATAGATACAAAATGTATCAAAAT
GS, FT McDonnell GE, et al. 1994
xre ND ND Negative 1321049..1321076 (probably) around -20 AAGTTATGATAAAAAAAGTATCAAAAAT
GS, FT McDonnell GE, et al. 1994




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2004
Contact: knakai@ims.u-tokyo.ac.jp