PSSM : Position Specific Scoring Matrix
| No. | A | C | G | T |
| 1 | -1.6 | -1.6 | -1.6 | 1.3 |
| 2 | -1.6 | -1.6 | -1.6 | 1.3 |
| 3 | 1.3 | -1.6 | -1.6 | -1.6 |
| 4 | -1.6 | -1.6 | 2.0 | -1.6 |
| 5 | -1.6 | 2.0 | -1.6 | -1.6 |
| 6 | 1.3 | -1.6 | -1.6 | -1.6 |
| 7 | -1.6 | 2.0 | -1.6 | -1.6 |
| 8 | -1.6 | -1.6 | -1.6 | 1.3 |
| 9 | -1.6 | 2.0 | -1.6 | -1.6 |
| 10 | -1.6 | -1.6 | 1.1 | 0.5 |
| 11 | -1.6 | 1.1 | -1.6 | 0.5 |
| 12 | -1.6 | -1.6 | -1.6 | 1.3 |
| 13 | 0.5 | -1.6 | -1.6 | 0.5 |
| 14 | 0.5 | -1.6 | 1.1 | -1.6 |
| 15 | -1.6 | -1.6 | -1.6 | 1.3 |
| 16 | -1.6 | -1.6 | 1.1 | 0.5 |
| 17 | -1.6 | 1.1 | 1.1 | -1.6 |
| 18 | 0.5 | -1.6 | -1.6 | 0.5 |
| 19 | -1.6 | -1.6 | 2.0 | -1.6 |
| 20 | 1.3 | -1.6 | -1.6 | -1.6 |
| 21 | -1.6 | -1.6 | 2.0 | -1.6 |
| 22 | -1.6 | -1.6 | -1.6 | 1.3 |
| 23 | -1.6 | -1.6 | 2.0 | -1.6 |
| 24 | -1.6 | 2.0 | -1.6 | -1.6 |
| 25 | -1.6 | -1.6 | -1.6 | 1.3 |
| 26 | 1.3 | -1.6 | -1.6 | -1.6 |
| 27 | 1.3 | -1.6 | -1.6 | -1.6 |
Link to : Motif alignment