| sinI_2_compl | TTCATTAGTCTCTGGAAGTC-----ATTTGCCATTAA-----ATCACCAGAATT-------- |
| sinI_1_compl | TTCATTAGTCTCTGGAAGTC-----ATTTGCCATTAA-----ATCACCAGAAT--------- |
| comK | AAATGTTAAAAAAACCTGTC-----GTTTTACAAAAA-----CAGATGATAGATTATTAGTA |
| abrB_compl | -------CATAGCATAACAA-----GGTTTCCAATAA-----TCGTCAATCATTTTGTTTAC |
| rbsR_1 | TTCATCCATATTTGTGAAGA-----CTTTGTCAAAAA-----AAGAGTGAAAACCTTAAATT |
| hutP | GTAGTAGCCGCAATTGAAAC-----CGCTTCCAAAAA-----GAGCGGTGTCA--------- |
| spo0H_compl | AGATAGAAATATTATACAGT-----ATTGGGCAAAAA-----AGCGTCAACTTAATCTA--- |
| rbsR_2 | -GATAATCTATCTATGTAAA-----CGGTTACATAAA-----CAAGGAGGAGCTGTTTTGGC |
| ftsA_2_compl | ----------CTTTACAAGT-----GTGTAACAAAAA-----ATAACAACAGAATATTTTTA |
| spoVG | ATATTTTAAAAACGAGCAGG-----ATTTCAGAAAAA-----ATCGTGGAATTGATACACTA |
| aprE | CTACTAAAATATTATTCCAT-----CTATTACAATAA-----ATTCACAGAATAGTCTTTTA |
| pbpE_2 | --------TCTAACTGAAGG-----ATTTTTCAAAAT-----ATTTGAAACGTTAGTAGGTT |
| sigW | ---------GGTGAAGGCAG-----AGGTTAGATAAA-----TATGGAAATGATGATTAAAA |
| spo0E | -------TTAATGAAAATAT-----GTTTACAAATAA-----AGTATAATCTGTAATAATGC |
| dppA_compl | CCTTTTTTACTAAATTATGA-----ATATTCTAACAA-----ATTATATTAAAAAAAGAGGA |
| pbpE_1 | -----CGGCAGGTATATGTG-----ATGGGTTAAAAA-----GGATCTCTAACTGAAGGA-- |
| ftsA_1 | ----------GAATATTTTC-----AATAAACATAAA-----ATGTGAAAAGCACATAA--- |
Link to : Weight matrix