| spoIVCB_4 | ---------ATACATTTAC------ATATAGGCTT-----TTGCCTACATAC-------- |
| spoIVCB_4 | ---------GTATAGCGTG------ATATAGGCTT-----TTTTCAGGTTGC-------- |
| spoIVCB_2 | ---------ATACATTTAC------ATATAGGCTT-----TTGCCTACATAC-------- |
| spoIVCB_2 | ---------GTATAGCGTG------ATATAGGCTT-----TTTTCAGGTTGC-------- |
| spoIVCB_1 | ---------ATACATTTAC------ATATAGGCTT-----TTGCCTACATACTTTTGTGG |
| spoIVCB_5 | ---------CGATGGTTTA------ATGTAGGCAA-----AATCGTAAATAC-------- |
| spoIVCB_5 | ---------GTTCTCGGTG------ATGTAGGCAA-----AAACTTTGCGGC-------- |
| spoIVCB_3 | ---------CGATGGTTTA------ATGTAGGCAA-----AATCGTAAATAC-------- |
| spoIVCB_3 | ---------GTTCTCGGTG------ATGTAGGCAA-----AAACTTTGCGGC-------- |
| cgeA_4 | ---------TCGATTTATG------GTATAGGCTA-----TGTCCACTCCAT-------- |
| cotY_1 | ----AAGCATATGATGAAT------ATATAGACGT-----TCACCCACACCAAGTGGGG- |
| cotB_2 | -ATTCGCGGAAAAAGCGAC------AATTAGGCTA-----TTGAATTAGTTCA------- |
| cotD_1 | ---------TTTCTTCTTG------AAATAGGTCT-----TTTCCAAACGAT-------- |
| cotD_1 | ---------CACACTTTTA------AAATAGGTCT-----TTGCATCAGAAC-------- |
| cotB_1 | -------ATGAATGCGTGA------AAATGGGTAT-----TCGCGGAAAAAGCGACAA-- |
| ftsY_2 | ---------ATCATCCAAT------ATACAGGCGT-----TTCTGACTGTAA-------- |
| ftsY_2 | ---------GCATGACTTC------ATACAGGCGT-----TTGTGGCCCATA-------- |
| yqeE | -----TATGGTCACTCCCA------ACTTAGGTGA-----TGTCAGGAGTCAAAACC--- |
| cotX_1 | -----TAGCCAATCATAAA------AAATAGGGTT-----CTTCATCAGGATATATG--- |
| cotC_1 | --------TAGGATAAATC------GTTTGGGCCG-----ATGAAAAATCGGCTC----- |
| cgeA_5 | ---------CTGTTTCACA------ATATGTGCGA-----CTTCGATTTATG-------- |
| cgeA_2 | ---------GTAAGGAGAG------AAATAGATGA-----AAAAACAACGAA-------- |
| cgeA_2 | ---------CGTTACATAC------AAATAGATGA-----AAACGAGATATT-------- |
| ftsY_1 | ---------AAGAAGTCAA------ACTTGGACGA-----ATGGAAGTCGAG-------- |
| cotG | ---------TTTATTCCCG------TTTTAGGCTT-----TATTTTATACTT-------- |
| cotG | ---------CTAGGAATTA------TTTTAGGCTT-----TATTGGCGCCGG-------- |
| cgeA_1 | ---------TGCGGCAGTC------AAATAGATCA-----GGCGGGAGAACA-------- |
| cotC_2 | ------GTCTTTTTCTATC------ATTTGGACAG-----CCCTTTTTTCCTTCTATGA- |
| cgeA_3 | ---------GGCCATCTGC------AAATCAGCAT-----TTATCGGGCGGC-------- |
| cgeA_3 | ---------GCCGGAGTGA------AAATCAGCAT-----TTTCACTCTAGT-------- |
| cotV_compl | GTGCAGAGCGGAATAATAA------AAATAACCAA-----TTTTCTGCCGGAC------- |
| cotX_2_compl | ---GGTTCTTCATCAGGAT------ATATGACTCA-----GTCAAAATAAGAG------- |
| cgeC | ---------GACTGGTTCA------GTATGAGTCG-----AAGGTGCAGAGA-------- |
| cgeC | ---------CTGTTATTTG------GTATGAGTCG-----AACGCCGTACCT-------- |
| sspG_2_compl | --------AGATTGGACGA------ACTTCGCGGT-----TTTTCCACATTA-------- |
| cotD_2 | ---------TCCCATCTTT------TAAGGGGTAT-----AATGGGTTTC---------- |
| cotD_2 | ---------AAAAAGTTTT------TAAGGGGTAT-----TAAATATTTA---------- |
| sspG_1_compl | ---------ATCTCATCGG------AGGAAAGCAT-----TTTCCCGTAAGC-------- |
| sspG_1_compl | ---------CTTTATGGAC------AGGAAAGCAT-----TTTCAAGTTACT-------- |
Link to : Weight matrix